RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 DYNAPQ8N1N2 210 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 OR5T1Q8NG75 326 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 FAM167A-AS1Q96KT0 104 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 OR5B12Q96R08 314 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 SSX3Q99909 188 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 PIMREGQ9BSJ6 248 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 SLC25A2Q9BXI2 301 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 ZNF355PQ9NSJ1 428 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 TRAV5A0A0B4J249 113 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 NCBP2LA6PVI3 153 aaKnown RBP6.9□□□□□ -1.31
LSAMP-201ENST00000333617 NPIPB6E9PJ23 425 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 I3L2K1 104 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 OR10J4P0C629 311 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 TMEM11P17152 192 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 S100PP25815 95 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 GALR1P47211 349 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.31
LSAMP-201ENST00000333617 PATE2Q6UY27 113 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 Q8N6K4 173 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 OR5AU1Q8NGC0 362 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 OR1B1Q8NGR6 318 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 PERPQ96FX8 193 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 LPAR2Q9HBW0 351 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.31
LSAMP-201ENST00000333617 KLF2Q9Y5W3 355 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-201ENST00000333617 CSPG4Q6UVK1 2322 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 A0A1W2PRE2 83 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 NDUFS8O00217 210 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 PPP1R2P9O14990 202 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 FAM106CPP0CH98 169 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 RNF224P0DH78 156 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 CD99P14209 185 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 ORM2P19652 201 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 BRS3P32247 399 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 MORN5Q5VZ52 161 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 ZNF562Q6V9R5 426 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 LINC00305Q7Z4B0 112 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 ARPC1AQ92747 370 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 FAM103A1Q9BTL3 118 aaKnown RBP6.89□□□□□ -1.31
LSAMP-201ENST00000333617 PAXXQ9BUH6 204 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 OR51M1Q9H341 326 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 C1RLQ9NZP8 487 aa6.89□□□□□ -1.31
LSAMP-201ENST00000333617 USP9YO00507 2555 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 MDFIC2A0A1B0GVS7 189 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 PGPEP1LA6NFU8 196 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 K7EIM0 57 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 TGOLN2O43493 480 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 HYPMO75409 117 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 PRB1P04280 392 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 PYYP10082 97 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 SAA4P35542 130 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 SRP14P37108 136 aaKnown RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 RPL35P42766 123 aaKnown RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 SNRPEP62304 92 aaKnown RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 CX3CL1P78423 397 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 CLEC2AQ6UVW9 174 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 LCNL1Q6ZST4 164 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 NECAP1Q8NC96 275 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 STXBP6Q8NFX7 210 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 RASL11BQ9BPW5 248 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-201ENST00000333617 POLQO75417 2590 aa6.88□□□□□ -1.31
LSAMP-201ENST00000333617 IGHV4-61A0A0C4DH41 118 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 HELTA6NFD8 242 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 VWC2LB2RUY7 222 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 C9JCJ5 164 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 NPFFO15130 113 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 FABP1P07148 127 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 CRYBB3P26998 211 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 ATP5J2P56134 94 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 PLP1P60201 277 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
LSAMP-201ENST00000333617 KCNIP4Q6PIL6 250 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 BBC3Q96PG8 261 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-201ENST00000333617 RBM14Q96PK6 669 aaKnown RBP6.87□□□□□ -1.31
LSAMP-201ENST00000333617 LY96Q9Y6Y9 160 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
LSAMP-201ENST00000333617 CENPVL3A0A0U1RRI6 287 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 PSG1P11464 419 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 HNF1AP20823 631 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 GNG4P50150 75 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 AKR1D1P51857 326 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 LYZP61626 148 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 NDPQ00604 133 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 PAX8Q06710 450 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms