RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MPV17L2Q567V2 206 aa19.04■□□□□ 0.64
TSKU-201ENST00000333090 MOSP00540 346 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 MYCNOSP40205 109 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 GPR82Q96P67 336 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 GAL3ST2Q9H3Q3 398 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 RPP21Q9H633 154 aaKnown RBP19.03■□□□□ 0.64
TSKU-201ENST00000333090 hADV38S2A0JD32 116 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 hDV102S1A0JD36 115 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 VAMP3Q15836 100 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 PGLYRP4Q96LB8 373 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 KALRNO60229 2985 aa19.03■□□□□ 0.64
TSKU-201ENST00000333090 ZFHX2Q9C0A1 2572 aaPredicted RBP19.03■□□□□ 0.64
TSKU-201ENST00000333090 IGHV1-24A0A0C4DH33 117 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 IGHV2-70DA0A0C4DH43 119 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 OR1B1Q8NGR6 318 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 IGLV3-9A0A075B6K5 115 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 CGB1A6NKQ9 187 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 IGHV1-46P01743 117 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 ZNF137PP52743 207 aa19.02■□□□□ 0.64
TSKU-201ENST00000333090 LEPROTL1O95214 131 aa19.02■□□□□ 0.63
TSKU-201ENST00000333090 GTSF1Q8WW33 167 aa19.02■□□□□ 0.63
TSKU-201ENST00000333090 ROS1P08922 2347 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 H3BTX0 84 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 SYS1-DBNDD2H3BUS1 97 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 CCL3L1P16619 93 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 CEACAM8P31997 349 aaPredicted RBP19.01■□□□□ 0.63
TSKU-201ENST00000333090 LOXL4Q96JB6 756 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 WASHC3Q9Y3C0 194 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 A8MWL6 223 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 K7EP13 123 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 P01737 135 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 SUB1P53999 127 aaKnown RBP eCLIP19.01■□□□□ 0.63
TSKU-201ENST00000333090 SEM1Q6ZVN7 128 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 SSUH2Q9Y2M2 353 aa19.01■□□□□ 0.63
TSKU-201ENST00000333090 ABCA1O95477 2261 aa19■□□□□ 0.63
TSKU-201ENST00000333090 DIAPH2-AS1Q14236 149 aa19■□□□□ 0.63
TSKU-201ENST00000333090 TMEM177Q53S58 311 aa19■□□□□ 0.63
TSKU-201ENST00000333090 FAM162BQ5T6X4 162 aa19■□□□□ 0.63
TSKU-201ENST00000333090 OR5AN1Q8NGI8 311 aa19■□□□□ 0.63
TSKU-201ENST00000333090 ST20Q9HBF5 79 aa19■□□□□ 0.63
TSKU-201ENST00000333090 LINC00312Q9Y6C7 94 aa19■□□□□ 0.63
TSKU-201ENST00000333090 CRXO43186 299 aaPredicted RBP19■□□□□ 0.63
TSKU-201ENST00000333090 TMEM30BQ3MIR4 351 aa19■□□□□ 0.63
TSKU-201ENST00000333090 TRAV17A0A0B4J275 112 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 TIMM23BQ5SRD1 257 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 ZNF474Q6S9Z5 364 aaPredicted RBP18.99■□□□□ 0.63
TSKU-201ENST00000333090 THAP8Q8NA92 274 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 TMEM167AQ8TBQ9 72 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 PERPQ96FX8 193 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 MLST8Q9BVC4 326 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 NUDT3O95989 172 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 NBEAP1P0C6P0 100 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 RUSC1-AS1Q66K80 236 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 OR4C13Q8NGP0 309 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 KLF12Q9Y4X4 402 aa18.99■□□□□ 0.63
TSKU-201ENST00000333090 INS-IGF2F8WCM5 200 aa18.98■□□□□ 0.63
TSKU-201ENST00000333090 H0Y8G0 127 aa18.98■□□□□ 0.63
TSKU-201ENST00000333090 STXBP6Q8NFX7 210 aa18.98■□□□□ 0.63
TSKU-201ENST00000333090 MCRIP2Q9BUT9 160 aaKnown RBP18.98■□□□□ 0.63
TSKU-201ENST00000333090 DYSFO75923 2080 aa18.98■□□□□ 0.63
TSKU-201ENST00000333090 LRRC10Q5BKY1 277 aa18.98■□□□□ 0.63
TSKU-201ENST00000333090 CHCHD1Q96BP2 118 aaKnown RBP18.98■□□□□ 0.63
TSKU-201ENST00000333090 PIEZO2Q9H5I5 2752 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 OR10X1Q8NGY0 326 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 VSTM2AQ8TAG5 236 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 DAZAP1Q96EP5 407 aaKnown RBP18.97■□□□□ 0.63
TSKU-201ENST00000333090 PRSS22Q9GZN4 317 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 BSNQ9UPA5 3926 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 C22orf46C9J442 243 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 ZNF138P52744 262 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 RNF151Q2KHN1 245 aa18.97■□□□□ 0.63
TSKU-201ENST00000333090 CCL8P80075 99 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 HCP5Q6MZN7 132 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 SLC25A34Q6PIV7 304 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 SMIM12Q96EX1 92 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 TIMM8BQ9Y5J9 83 aaPredicted RBP18.96■□□□□ 0.63
TSKU-201ENST00000333090 DEFB109BQ30KR1 87 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 TPSG1Q9NRR2 321 aa18.96■□□□□ 0.63
TSKU-201ENST00000333090 HSBP1L1C9JCN9 74 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 CHEK1O14757 476 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 SLC25A17O43808 307 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 ZCCHC24Q8N2G6 241 aaKnown RBP18.95■□□□□ 0.62
TSKU-201ENST00000333090 TMEM191AQ9H0A3 160 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 IGHV3-21A0A0B4J1V1 117 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 A0A1W2PPI3 338 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 FTH1P19P0C7X4 201 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 RBPMS2Q6ZRY4 209 aaKnown RBP18.95■□□□□ 0.62
TSKU-201ENST00000333090 C5orf17Q8NAS9 161 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 ZNF835Q9Y2P0 537 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 ZNF292O60281 2723 aa18.95■□□□□ 0.62
TSKU-201ENST00000333090 C19orf71A6NCJ1 209 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 LTAP01374 205 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 APELAP0DMC3 54 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 CDKN1BP46527 198 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 RPRMLQ8N4K4 120 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 FMC1Q96HJ9 113 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 C1RLQ9NZP8 487 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 TRAV30A0A087WSZ9 112 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 FAM87AP0C7U9 286 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 CT83Q5H943 113 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms