RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 UNQ5815/PRO19632Q6UWF5 114 aa14.05□□□□□ -0.16
ACTB-201ENST00000331789 C11orf52Q96A22 123 aa14.05□□□□□ -0.16
ACTB-201ENST00000331789 FXYD5Q96DB9 178 aa14.05□□□□□ -0.16
ACTB-201ENST00000331789 TMEM242Q9NWH2 141 aa14.05□□□□□ -0.16
ACTB-201ENST00000331789 A0A1W2PRE2 83 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 CLDN34H7C241 214 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 CXCL1P09341 107 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 CRYBB3P26998 211 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 LEMD1Q68G75 181 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 LINC01551Q86U37 167 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 ZFP82Q8N141 532 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 TMUB1Q9BVT8 246 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 HIGD1AQ9Y241 93 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 CSMD1Q96PZ7 3565 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 POLQO75417 2590 aa14.04□□□□□ -0.16
ACTB-201ENST00000331789 TGIF2-C20orf24A0A0A6YYL0 155 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 TRAV20A0A0B4J274 112 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 MFAP4P55083 255 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 LINC01356Q8N9X3 169 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 CTDSP1Q9GZU7 261 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 F8W735 103 aaPredicted RBP14.03□□□□□ -0.16
ACTB-201ENST00000331789 GNG7O60262 68 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 FAM110DQ8TAY7 271 aaPredicted RBP14.03□□□□□ -0.16
ACTB-201ENST00000331789 FBXL7Q9UJT9 491 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 MOB4Q9Y3A3 225 aa14.03□□□□□ -0.16
ACTB-201ENST00000331789 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.03□□□□□ -0.161e-13■■■□□ 14.7
ACTB-201ENST00000331789 MAP1AP78559 2803 aaPredicted RBP14.02□□□□□ -0.16
ACTB-201ENST00000331789 G3V318 75 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 AMY1AP04745 511 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 HNF1AP20823 631 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 LY6EQ16553 131 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 Q56UQ5 140 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 OCC1Q8TAD7 63 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 C21orf62Q9NYP8 219 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 THYN1Q9P016 225 aa14.02□□□□□ -0.16
ACTB-201ENST00000331789 CELSR2Q9HCU4 2923 aa14.02□□□□□ -0.17
ACTB-201ENST00000331789 RNF223E7ERA6 249 aa14.02□□□□□ -0.17
ACTB-201ENST00000331789 TOMM40O96008 361 aa14.02□□□□□ -0.17
ACTB-201ENST00000331789 FABP1P07148 127 aa14.02□□□□□ -0.17
ACTB-201ENST00000331789 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.17
ACTB-201ENST00000331789 ELOVL1Q9BW60 279 aa14.02□□□□□ -0.17
ACTB-201ENST00000331789 MRPL27Q9P0M9 148 aaKnown RBP14.02□□□□□ -0.17
ACTB-201ENST00000331789 USP9YO00507 2555 aaPredicted RBP14.01□□□□□ -0.17
ACTB-201ENST00000331789 GATA3P23771 443 aa14.01□□□□□ -0.17
ACTB-201ENST00000331789 DEFB113Q30KQ7 82 aa14.01□□□□□ -0.17
ACTB-201ENST00000331789 NECAP1Q8NC96 275 aa14.01□□□□□ -0.17
ACTB-201ENST00000331789 BLNKQ8WV28 456 aa14.01□□□□□ -0.17
ACTB-201ENST00000331789 SLC25A39Q9BZJ4 359 aaPredicted RBP14.01□□□□□ -0.17
ACTB-201ENST00000331789 BEX4Q9NWD9 120 aaPredicted RBP14.01□□□□□ -0.17
ACTB-201ENST00000331789 PRELID1Q9Y255 219 aa14.01□□□□□ -0.17
ACTB-201ENST00000331789 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
ACTB-201ENST00000331789 H3BUX3 64 aa14□□□□□ -0.17
ACTB-201ENST00000331789 FLI1Q01543 452 aaPredicted RBP14□□□□□ -0.17
ACTB-201ENST00000331789 ZNF491Q8N8L2 437 aa14□□□□□ -0.17
ACTB-201ENST00000331789 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
ACTB-201ENST00000331789 C2CD4CQ8TF44 421 aa14□□□□□ -0.17
ACTB-201ENST00000331789 ZNF48Q96MX3 618 aaPredicted RBP14□□□□□ -0.17
ACTB-201ENST00000331789 CENPEQ02224 2701 aa14□□□□□ -0.17
ACTB-201ENST00000331789 PTPN13Q12923 2485 aa14□□□□□ -0.17
ACTB-201ENST00000331789 HELTA6NFD8 242 aa14□□□□□ -0.17
ACTB-201ENST00000331789 C1orf196B1AJZ1 125 aa14□□□□□ -0.17
ACTB-201ENST00000331789 H7BYZ3 331 aa14□□□□□ -0.17
ACTB-201ENST00000331789 GP9P14770 177 aa14□□□□□ -0.17
ACTB-201ENST00000331789 YPEL3P61236 119 aaPredicted RBP14□□□□□ -0.17
ACTB-201ENST00000331789 ZNF329Q86UD4 541 aa14□□□□□ -0.17
ACTB-201ENST00000331789 CR1P17927 2039 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 WI2-2373I1.2A0A1W2PRP0 233 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 OR2T8A6NH00 312 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 H3BTX0 84 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 TGFAP01135 160 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 IL4P05112 153 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 HIST1H1BP16401 226 aaKnown RBP13.99□□□□□ -0.17
ACTB-201ENST00000331789 RPS10P46783 165 aaKnown RBP13.99□□□□□ -0.17
ACTB-201ENST00000331789 RANP62826 216 aaKnown RBP13.99□□□□□ -0.17
ACTB-201ENST00000331789 ANAPC16Q96DE5 110 aa13.99□□□□□ -0.17
ACTB-201ENST00000331789 KMT2BQ9UMN6 2715 aaPredicted RBP13.99□□□□□ -0.17
ACTB-201ENST00000331789 A6NDX4 124 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 NBEAP1P0C6P0 100 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 LOXL1Q08397 574 aaPredicted RBP13.98□□□□□ -0.17
ACTB-201ENST00000331789 C9orf152Q5JTZ5 239 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 HIST2H2BCQ6DN03 193 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 BCL6BQ8N143 479 aaPredicted RBP13.98□□□□□ -0.17
ACTB-201ENST00000331789 RNF125Q96EQ8 232 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 MDFIC2A0A1B0GVS7 189 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 K7EN84 100 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 PFN1P07737 140 aaKnown RBP13.98□□□□□ -0.17
ACTB-201ENST00000331789 RHOGP84095 191 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 LINC00527Q9UJ94 153 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
ACTB-201ENST00000331789 C9JCJ5 164 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 CTSGP08311 255 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 MYCNOSP40205 109 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 GALR1P47211 349 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 RAB5BP61020 215 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 C15orf32Q32M92 178 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
ACTB-201ENST00000331789 Q5PR19 223 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms