RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 REG1BP48304 166 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 ZNF329Q86UD4 541 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 KLF14Q8TD94 323 aaPredicted RBP16.73■□□□□ 0.27
CMTM4-201ENST00000330687 WIPF2Q8TF74 440 aaPredicted RBP16.73■□□□□ 0.27
CMTM4-201ENST00000330687 MS4A6AQ9H2W1 248 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 CSN1S1P47710 185 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 PSG3Q16557 428 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 CIARTQ8N365 385 aaPredicted RBP16.73■□□□□ 0.27
CMTM4-201ENST00000330687 WDR31Q8NA23 367 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 SPAARA0A1B0GVQ0 90 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 hADV38S2A0JD32 116 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 CFIP05156 583 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 SAMD5Q5TGI4 173 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 PRNTQ86SH4 94 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 CEACAM3P40198 252 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 HSD52Q0P140 79 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 Q0VFX4 171 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 LINC00305Q7Z4B0 112 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 C1RLQ9NZP8 487 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 ZNF257Q9Y2Q1 563 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 IGKV1-16P04430 117 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 UFSP1Q6NVU6 142 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 CD177Q8N6Q3 437 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 OR2Z1Q8NG97 314 aa16.72■□□□□ 0.27
CMTM4-201ENST00000330687 RAB9AP51151 201 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 RASL11AQ6T310 242 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 Q71RC1 249 aaPredicted RBP16.71■□□□□ 0.27
CMTM4-201ENST00000330687 H3BRM9 83 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 SAA2P0DJI9 122 aaPredicted RBP16.71■□□□□ 0.27
CMTM4-201ENST00000330687 FCGR2BP31994 310 aaPredicted RBP16.71■□□□□ 0.27
CMTM4-201ENST00000330687 C10orf55Q5SWW7 151 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 ADAMTSL5Q6ZMM2 481 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 A0A1W2PPM0 123 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 WDR82Q6UXN9 313 aa16.71■□□□□ 0.27
CMTM4-201ENST00000330687 LOXL1Q08397 574 aaPredicted RBP16.7■□□□□ 0.26
CMTM4-201ENST00000330687 SH2D6Q7Z4S9 175 aa16.7■□□□□ 0.26
CMTM4-201ENST00000330687 CNEP1R1Q8N9A8 125 aa16.7■□□□□ 0.26
CMTM4-201ENST00000330687 SRSF12Q8WXF0 261 aaKnown RBP16.7■□□□□ 0.26
CMTM4-201ENST00000330687 CRXO43186 299 aaPredicted RBP16.7■□□□□ 0.26
CMTM4-201ENST00000330687 IGFBP4P22692 258 aa16.7■□□□□ 0.26
CMTM4-201ENST00000330687 B4GALT7Q9UBV7 327 aa16.7■□□□□ 0.26
CMTM4-201ENST00000330687 IFI27P40305 119 aaPredicted RBP16.69■□□□□ 0.26
CMTM4-201ENST00000330687 PEAR1Q5VY43 1037 aaPredicted RBP16.69■□□□□ 0.26
CMTM4-201ENST00000330687 FAM167A-AS1Q96KT0 104 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 GPR82Q96P67 336 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 IFI27L2Q9H2X8 130 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 NHP2Q9NX24 153 aaKnown RBP16.69■□□□□ 0.26
CMTM4-201ENST00000330687 EPDR1Q9UM22 224 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 ETDBQ3ZM63 59 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 RBPMS2Q6ZRY4 209 aaKnown RBP16.69■□□□□ 0.26
CMTM4-201ENST00000330687 DMDP11532 3685 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 GPR179Q6PRD1 2367 aa16.69■□□□□ 0.26
CMTM4-201ENST00000330687 CKS1BP61024 79 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 LCNL1Q6ZST4 164 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 LINC00470Q9BZP3 86 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 F2RL2O00254 374 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 SS18L1O75177 396 aaPredicted RBP16.68■□□□□ 0.26
CMTM4-201ENST00000330687 CYC1P08574 325 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 SP9P0CG40 484 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 AMTNQ6UX39 209 aa16.68■□□□□ 0.26
CMTM4-201ENST00000330687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.68■□□□□ 0.26
CMTM4-201ENST00000330687 MED13Q9UHV7 2174 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 C15orf65H3BRN8 121 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 TNFSF15O95150 251 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 ARMS2P0C7Q2 107 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 SCGB2A2Q13296 93 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 NRN1LQ496H8 165 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 ABHD17BQ5VST6 288 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 ZNF747Q9BV97 191 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 TRAV26-1A0A087WT03 109 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 A0A1B0GXF2 115 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 CFHR2P36980 270 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 WFDC2Q14508 124 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 ATP5L2Q7Z4Y8 100 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 ZADH2Q8N4Q0 377 aa16.67■□□□□ 0.26
CMTM4-201ENST00000330687 NEU4Q8WWR8 484 aaPredicted RBP16.67■□□□□ 0.26
CMTM4-201ENST00000330687 TRGV8A0A0C4DH27 118 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 ZNF766Q5HY98 468 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 CT45A1Q5HYN5 189 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 LINC01545Q5VT33 79 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 HCP5Q6MZN7 132 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 SFTA2Q6UW10 78 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 CT45A3Q8NHU0 189 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 GAGE12HA6NDE8 117 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 SRRM4A7MD48 611 aaKnown RBP16.66■□□□□ 0.26
CMTM4-201ENST00000330687 MGST3O14880 152 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 SMIM13P0DJ93 91 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 HOXC12P31275 282 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 ATP5G2Q06055 141 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 GOLT1AQ6ZVE7 132 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 FAM231DQ6ZW35 169 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 BCL6BQ8N143 479 aaPredicted RBP16.66■□□□□ 0.26
CMTM4-201ENST00000330687 ATP6V0BQ99437 205 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 TMEM14BQ9NUH8 114 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 CALYQ9NYX4 217 aa16.66■□□□□ 0.26
CMTM4-201ENST00000330687 K7EQM0 130 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 NDUFS8O00217 210 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 FAM87AP0C7U9 286 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 NEGR1Q7Z3B1 354 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 ARPC1AQ92747 370 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms