RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 C10orf55Q5SWW7 151 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 PAXXQ9BUH6 204 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 C2orf70A6NJV1 201 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 VWC2LB2RUY7 222 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 C9orf172C9J069 976 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 MMP23AO75900 390 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 APOA2P02652 100 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 MUC15Q8N387 334 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 TMEM14BQ9NUH8 114 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 SLC25A10Q9UBX3 287 aaPredicted RBP6.41□□□□□ -1.38
VMA21-201ENST00000330374 MGST3O14880 152 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 TOMM40O96008 361 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 CDKN1BP46527 198 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 COX19Q49B96 90 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 OR2V2Q96R30 315 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 NCOR1P1Q9H4R4 102 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 KALRNO60229 2985 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 TRGV8A0A0C4DH27 118 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 HSBP1L1C9JCN9 74 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 H0YJW9 148 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 PEX7O00628 323 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 LEPROTL1O95214 131 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 FAM90A1Q86YD7 464 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 NPIPB3Q92617 1050 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 MOSP00540 346 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 RBMXL3Q8N7X1 1067 aaKnown RBP6.4□□□□□ -1.38
VMA21-201ENST00000330374 TMEM160Q9NX00 188 aa6.4□□□□□ -1.38
VMA21-201ENST00000330374 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
VMA21-201ENST00000330374 A0A1W2PRE2 83 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 C10orf113Q5VZT2 155 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 GCSAMQ8N6F7 178 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 MRPL27Q9P0M9 148 aaKnown RBP6.4□□□□□ -1.39
VMA21-201ENST00000330374 TACC2O95359 2948 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 ITGB1BP1O14713 200 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 SLC25A34Q6PIV7 304 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 GRAMD2BQ96HH9 432 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 COMMD5Q9GZQ3 224 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 CST9LQ9H4G1 147 aa6.4□□□□□ -1.39
VMA21-201ENST00000330374 PGPA6NDG6 321 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 E7EUB6 86 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 SAA1P0DJI8 122 aaPredicted RBP6.39□□□□□ -1.39
VMA21-201ENST00000330374 INO80CQ6PI98 192 aaPredicted RBP6.39□□□□□ -1.39
VMA21-201ENST00000330374 OR1B1Q8NGR6 318 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 DDB2Q92466 427 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 CCL13Q99616 98 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 ZNF835Q9Y2P0 537 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 RIPPLY3P57055 190 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 FOXE3Q13461 319 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 MSMPQ1L6U9 139 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
VMA21-201ENST00000330374 ITLN1Q8WWA0 313 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 FAM167A-AS1Q96KT0 104 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 PRNDQ9UKY0 176 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 IGHV1-24A0A0C4DH33 117 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 K7EP13 123 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 KIR2DS2P43631 304 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 RBPJQ06330 500 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 FAM216BQ8N7L0 139 aa6.39□□□□□ -1.39
VMA21-201ENST00000330374 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 TRAV8-1A0A0A6YYK1 113 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 PPIAL4DF5H284 164 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 CHEK1O14757 476 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 HIST1H1EP10412 219 aaKnown RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 PRCDQ00LT1 54 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 TDHQ8IZJ6 230 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 FLYWCH2Q96CP2 140 aaKnown RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 SPTBN2O15020 2390 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 TRAV30A0A087WSZ9 112 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 UPK2O00526 184 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 RNASE2P10153 161 aaKnown RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 C17orf58Q2M2W7 97 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 Q71RC1 249 aaPredicted RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 LINC00305Q7Z4B0 112 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 PNKDQ8N490 385 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 C21orf140B9A014 251 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 M0R1B8 84 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 HBBP68871 147 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 RTL8BQ17RB0 113 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 HCP5Q6MZN7 132 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 MBD6Q96DN6 1003 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 WNK2Q9Y3S1 2297 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 A0A087WWL8 130 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 A0A1W2PNU3 283 aaPredicted RBP6.38□□□□□ -1.39
VMA21-201ENST00000330374 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 FXYD7P58549 80 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 PSG9Q00887 426 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 Q6ZT83 130 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms