RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CEACAM3P40198 252 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 FOXA3P55318 350 aaPredicted RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 LINC00696Q6ZRV3 163 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 SLC25A48Q6ZT89 311 aaKnown RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 PDPNQ86YL7 162 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 FAM222BQ8WU58 562 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 TMEM190Q8WZ59 177 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 LEAP2Q969E1 77 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 C7orf71A4D174 169 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 MOSP00540 346 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 P01737 135 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 HOXC12P31275 282 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 ERASQ7Z444 233 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 FAM169BQ8N8A8 192 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 OR2Z1Q8NG97 314 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 DEFB127Q9H1M4 99 aa9.09□□□□□ -0.95
GINS3-202ENST00000328514 CHTOPQ9Y3Y2 248 aaKnown RBP9.09□□□□□ -0.95
GINS3-202ENST00000328514 A0A087X0K7 114 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 OVOL3O00110 214 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 NBEAP1P0C6P0 100 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 CD46P15529 392 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 C5orf17Q8NAS9 161 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 OR10W1Q8NGF6 305 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 ITLN1Q8WWA0 313 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 DKK4Q9UBT3 224 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 FREM2Q5SZK8 3169 aa9.08□□□□□ -0.96
GINS3-202ENST00000328514 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 H3BRM9 83 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 TM4SF5O14894 197 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 AGFG2O95081 481 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 SLC25A5P05141 298 aaKnown RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 GNG5P63218 68 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 TMEM97Q5BJF2 176 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 ZNF833PQ6ZTB9 187 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 ZCCHC24Q8N2G6 241 aaKnown RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 OR4A5Q8NH83 315 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 PERPQ96FX8 193 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 ZNF747Q9BV97 191 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 FNDC4Q9H6D8 234 aaPredicted RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 RPUSD1Q9UJJ7 312 aaKnown RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 FZR1Q9UM11 496 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 SIT1Q9Y3P8 196 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 AHCTF1Q8WYP5 2266 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 IGHV3OR15-7A0A075B7D8 119 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 GAGE10A6NGK3 116 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 C9orf172C9J069 976 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 G3V4G9 280 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 FAM87AP0C7U9 286 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 FGF6P10767 208 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
GINS3-202ENST00000328514 TMEM177Q53S58 311 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 LINC00305Q7Z4B0 112 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 FER1L6-AS1Q8NA97 138 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 MEGF9Q9H1U4 602 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 ZFYVE26Q68DK2 2539 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 MAST4O15021 2626 aa9.07□□□□□ -0.96
GINS3-202ENST00000328514 DYSFO75923 2080 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 PGPA6NDG6 321 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 CHEK1O14757 476 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 HTR1DP28221 377 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 GATA4P43694 442 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 SUB1P53999 127 aaKnown RBP eCLIP9.06□□□□□ -0.96
GINS3-202ENST00000328514 TMEM167AQ8TBQ9 72 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 ASPMQ8IZT6 3477 aa9.06□□□□□ -0.96
GINS3-202ENST00000328514 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 A0A1B0GW15 77 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 SIVA1O15304 175 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 TCRAP04437 139 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 CRYGCP07315 174 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 OR5AN1Q8NGI8 311 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 NBEAQ8NFP9 2946 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
GINS3-202ENST00000328514 TANC2Q9HCD6 1990 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 A6NDN8 102 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 PATE3B3GLJ2 98 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 C22orf46C9J442 243 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 K7EP34 96 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 IGHG3P01860 377 aa9.05□□□□□ -0.96
GINS3-202ENST00000328514 GP9P14770 177 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms