RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 VSTM5A8MXK1 200 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 SPACA3Q8IXA5 215 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 FBXL7Q9UJT9 491 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 VPS13CQ709C8 3753 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 IGLV2-8P01709 118 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 SUB1P53999 127 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPSB1-201ENST00000328089 PDPNQ86YL7 162 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 NUP37Q8NFH4 326 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 TXNDC17Q9BRA2 123 aa15.17■□□□□ 0.02
SPSB1-201ENST00000328089 CREBBPQ92793 2442 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 POU2AF1Q16633 256 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 EXOC3-AS1Q8N2X6 119 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 RPEQ96AT9 228 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 IGKV1D-37A0A075B6S9 117 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 SH2D7A6NKC9 451 aaPredicted RBP15.16■□□□□ 0.02
SPSB1-201ENST00000328089 RPL27AP46776 148 aaKnown RBP15.16■□□□□ 0.02
SPSB1-201ENST00000328089 YPEL3P61236 119 aaPredicted RBP15.16■□□□□ 0.02
SPSB1-201ENST00000328089 KLRD1Q13241 179 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 CDC42EP3Q9UKI2 254 aa15.16■□□□□ 0.02
SPSB1-201ENST00000328089 MUC21A0A0G2JKD1 596 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 MUC21A0A140T8X8 626 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 SHISA9B4DS77 424 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 PEX7O00628 323 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 IGLV2-23P01705 113 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 MUC21Q5SSG8 566 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 NUDT10Q8NFP7 164 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 NUDT11Q96G61 164 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 MCRIP2Q9BUT9 160 aaKnown RBP15.15■□□□□ 0.02
SPSB1-201ENST00000328089 HIGD1CA8MV81 97 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 C9JCJ5 164 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 ITGB1BP1O14713 200 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 RNASEKQ6P5S7 137 aaKnown RBP15.15■□□□□ 0.02
SPSB1-201ENST00000328089 C11orf52Q96A22 123 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 TCRBV4S1A1TA0A5B7 111 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 APCSP02743 223 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 CDSNQ15517 529 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 TMEM249Q2WGJ8 235 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 VSTM2AQ8TAG5 236 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 TMEM186Q96B77 213 aa15.15■□□□□ 0.02
SPSB1-201ENST00000328089 BMPR1BO00238 502 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TFPI2P48307 235 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TDGF1P3P51864 188 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 CX3CL1P78423 397 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 MMDQ15546 238 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TMEM177Q53S58 311 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 VAMP8Q9BV40 100 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TMEM133Q9H2Q1 129 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 IGHV2-26A0A0B4J1V2 119 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 MEF2CQ06413 473 aaPredicted RBP15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 TMEM167AQ8TBQ9 72 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 PGLYRP4Q96LB8 373 aa15.14■□□□□ 0.01
SPSB1-201ENST00000328089 DIRC3C9JPN6 131 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 ZNF841Q6ZN19 808 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 ASCL5Q7RTU5 278 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 ZNF329Q86UD4 541 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 MUC15Q8N387 334 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 NEU1Q99519 415 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 PPIAL4CA0A0B4J2A2 164 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 CD3EP07766 207 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 NBEAP1P0C6P0 100 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 PPIAL4GP0DN37 164 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 LINC00322Q6ZN03 302 aaPredicted RBP15.13■□□□□ 0.01
SPSB1-201ENST00000328089 C17orf77Q96MU5 243 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 NRN1Q9NPD7 142 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 ZFYVE26Q68DK2 2539 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 CSPG4Q6UVK1 2322 aa15.13■□□□□ 0.01
SPSB1-201ENST00000328089 CSN3P07498 182 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 NOL4LQ96MY1 436 aaPredicted RBP15.12■□□□□ 0.01
SPSB1-201ENST00000328089 TP73-AS1Q9UF72 201 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 A0A1W2PRE2 83 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 TCAPO15273 167 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 ZNF138P52744 262 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 NUP35Q8NFH5 326 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 FXYD5Q96DB9 178 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 CRYBG3Q68DQ2 2970 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 IGLC7A0M8Q6 106 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 BRS3P32247 399 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 TMEM155Q4W5P6 130 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 PRNTQ86SH4 94 aa15.12■□□□□ 0.01
SPSB1-201ENST00000328089 CCL21O00585 134 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 GDF5OSQ5U4N7 250 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 CIARTQ8N365 385 aaPredicted RBP15.11■□□□□ 0.01
SPSB1-201ENST00000328089 C11orf42Q8N5U0 333 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 CACNG8Q8WXS5 425 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 ZNF586Q9NXT0 402 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 TMSB15BA0A087X1C1 80 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 A0A1W2PS18 150 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 RPL19P84098 196 aaKnown RBP15.11■□□□□ 0.01
SPSB1-201ENST00000328089 TBR1Q16650 682 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 Q56UQ5 140 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 C22orf15Q8WYQ4 148 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 ST6GALNAC6Q969X2 333 aa15.11■□□□□ 0.01
SPSB1-201ENST00000328089 PSG1P11464 419 aa15.1■□□□□ 0.01
SPSB1-201ENST00000328089 BCL6BQ8N143 479 aaPredicted RBP15.1■□□□□ 0.01
SPSB1-201ENST00000328089 OR1L4Q8NGR5 311 aa15.1■□□□□ 0.01
SPSB1-201ENST00000328089 HYPMO75409 117 aa15.1■□□□□ 0.01
SPSB1-201ENST00000328089 TPTE2P1Q5T6R2 138 aa15.1■□□□□ 0.01
SPSB1-201ENST00000328089 GOLT1AQ6ZVE7 132 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms