RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
SSH1-201ENST00000326470 TNFAIP6P98066 277 aaPredicted RBP13.48□□□□□ -0.25
SSH1-201ENST00000326470 LINC00173Q6ZV60 143 aa13.48□□□□□ -0.25
SSH1-201ENST00000326470 MRPL36Q9P0J6 103 aaKnown RBP13.48□□□□□ -0.25
SSH1-201ENST00000326470 TP73-AS1Q9UF72 201 aa13.48□□□□□ -0.25
SSH1-201ENST00000326470 LINC00312Q9Y6C7 94 aa13.48□□□□□ -0.25
SSH1-201ENST00000326470 CEACAM8P31997 349 aaPredicted RBP13.47□□□□□ -0.25
SSH1-201ENST00000326470 RHOGP84095 191 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 VAMP3Q15836 100 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 OR4A5Q8NH83 315 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 BLNKQ8WV28 456 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 PERPQ96FX8 193 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 ZNF492Q9P255 531 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 C19orf71A6NCJ1 209 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 CCL11P51671 97 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 ZCCHC24Q8N2G6 241 aaKnown RBP13.47□□□□□ -0.25
SSH1-201ENST00000326470 FDCSPQ8NFU4 85 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 VSTM2AQ8TAG5 236 aa13.47□□□□□ -0.25
SSH1-201ENST00000326470 PRRC2CQ9Y520 2896 aaKnown RBP13.46□□□□□ -0.25
SSH1-201ENST00000326470 hDV102S1A0JD36 115 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 P01737 135 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 CD24P25063 80 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 TIMM23BQ5SRD1 257 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 C10orf55Q5SWW7 151 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 SLC25A34Q6PIV7 304 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 PGLYRP4Q96LB8 373 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 GFRA4Q9GZZ7 299 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
SSH1-201ENST00000326470 TAX1BP3O14907 124 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 NUDT3O95989 172 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 LTAP01374 205 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 NBEAP1P0C6P0 100 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 OR4C13Q8NGP0 309 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 FMC1Q96HJ9 113 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 TMEM191AQ9H0A3 160 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 OR5AL1P0C617 328 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 ORM2P19652 201 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
SSH1-201ENST00000326470 ARL6IP6Q8N6S5 226 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 NDFIP1Q9BT67 221 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
SSH1-201ENST00000326470 RAI1Q7Z5J4 1906 aaPredicted RBP13.45□□□□□ -0.26
SSH1-201ENST00000326470 SEM1Q6ZVN7 128 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 C5orf17Q8NAS9 161 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 HSBP1L1C9JCN9 74 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 LIPFP07098 398 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 RPS20P60866 119 aaKnown RBP13.44□□□□□ -0.26
SSH1-201ENST00000326470 TEX36Q5VZQ5 186 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 C12orf54Q6X4T0 127 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 DEFB125Q8N687 156 aa13.44□□□□□ -0.26
SSH1-201ENST00000326470 DCHS1Q96JQ0 3298 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
SSH1-201ENST00000326470 TRAV17A0A0B4J275 112 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 FAM231BA6NCW3 169 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 C22orf46C9J442 243 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 C3orf36Q3SXR2 165 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 PET117Q6UWS5 81 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 TCRAP04437 139 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 DAZAP1Q96EP5 407 aaKnown RBP13.43□□□□□ -0.26
SSH1-201ENST00000326470 MAP1LC3CQ9BXW4 147 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 SCRT2Q9NQ03 307 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 LAMA5O15230 3695 aa13.43□□□□□ -0.26
SSH1-201ENST00000326470 PTPRZ1P23471 2315 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 MBD3L4A6NDZ8 208 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 MBD3L3A6NE82 208 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 MBD3L5A6NJ08 208 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 NKX2-8O15522 239 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 HLA-DRB1P01911 266 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 CRYGCP07315 174 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 MEF2CQ06413 473 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 MBD3L2Q8NHZ7 208 aaPredicted RBP13.42□□□□□ -0.26
SSH1-201ENST00000326470 NPIPB6E9PJ23 425 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 ZNF137PP52743 207 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 COTL1Q14019 142 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 ETFRF1Q6IPR1 90 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 TRGV9Q99603 122 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 CFAP47Q6ZTR5 3102 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 NAV3Q8IVL0 2385 aa13.42□□□□□ -0.26
SSH1-201ENST00000326470 DSPP15924 2871 aaKnown RBP13.41□□□□□ -0.26
SSH1-201ENST00000326470 A0A1W2PPI3 338 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 CHEK1O14757 476 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 GP9P14770 177 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 CCL3L1P16619 93 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 RUSC1-AS1Q66K80 236 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 ERASQ7Z444 233 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 LHFPL4Q7Z7J7 247 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 MS4A6AQ9H2W1 248 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 Q9H3A6 140 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 ZFHX4Q86UP3 3567 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 MUC21A0A0G2JKD1 596 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 MUC21A0A140T8X8 626 aa13.41□□□□□ -0.26
SSH1-201ENST00000326470 MUC21Q5SSG8 566 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms