RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RLFQ13129 1914 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 GFRA1P56159 465 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 ZNF362Q5T0B9 420 aaPredicted RBP8.2□□□□□ -1.1
COL12A1-201ENST00000322507 FAM159AQ6UWV7 190 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 CGB1A6NKQ9 187 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 PEMTQ9UBM1 199 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 PILRAQ9UKJ1 303 aa8.2□□□□□ -1.1
COL12A1-201ENST00000322507 TICRRQ7Z2Z1 1910 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 GFRA3O60609 400 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 MYOD1P15172 320 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 COL9A1P20849 921 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 ZNF488Q96MN9 340 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 UCN2Q96RP3 112 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 TM2D1Q9BX74 207 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 IGHG3P01860 377 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 UBE2BP63146 152 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 Q6ZT83 130 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 LINC00305Q7Z4B0 112 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 RPRMLQ8N4K4 120 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 C15orf53Q8NAA6 179 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 OSTCQ9NRP0 149 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 D6R8Y8 96 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 C1QL3Q5VWW1 255 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 F2Z2F3 143 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 GCHFRP30047 84 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 IFITM3Q01628 133 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 DUX3Q96PT4 197 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 UPK2O00526 184 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 TIMM23O14925 209 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 HTN1P15515 57 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 CTHRC1Q96CG8 243 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 LHFPL6Q9Y693 200 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 VSIG10L2P0DP72 767 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 RND2P52198 227 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 OTORQ9NRC9 128 aa8.19□□□□□ -1.1
COL12A1-201ENST00000322507 IGLV1-36A0A0B4J1U3 117 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 CD33P20138 364 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 PATE4P0C8F1 98 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 ANAPC10Q9UM13 185 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 PLXNA2O75051 1894 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 CEACAM4O75871 244 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 FOXL1Q12952 345 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 C3AR1Q16581 482 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 A0A1W2PRE2 83 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 OBSL1O75147 1896 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 TAL2Q16559 108 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 NEU4Q8WWR8 484 aaPredicted RBP8.18□□□□□ -1.1
COL12A1-201ENST00000322507 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 NBL1P41271 181 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 KLF5Q13887 457 aaPredicted RBP8.18□□□□□ -1.1
COL12A1-201ENST00000322507 MUC4Q99102 2169 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 NLRC5Q86WI3 1866 aa8.18□□□□□ -1.1
COL12A1-201ENST00000322507 SAA1P0DJI8 122 aaPredicted RBP8.18□□□□□ -1.1
COL12A1-201ENST00000322507 SYS1-DBNDD2H3BUS1 97 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 LYL1P12980 280 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 DCAF12L2Q5VW00 463 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 SLC25A48Q6ZT89 311 aaKnown RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 TNS1Q9HBL0 1735 aaKnown RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 IGLV3-21P80748 117 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 RNF138Q8WVD3 245 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 CLPSL1A2RUU4 121 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 WDR90Q96KV7 1748 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 NAV3Q8IVL0 2385 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM42Q69YG0 159 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM54Q969K7 222 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 TCF19Q9Y242 345 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 PDLIM4P50479 330 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 SPG11Q96JI7 2443 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 A4D1N5 150 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 CELA2BP08218 269 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 PEBP1P30086 187 aaKnown RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 ASCL2Q99929 193 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 ZNF71Q9NQZ8 489 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-201ENST00000322507 DLL3Q9NYJ7 618 aa8.17□□□□□ -1.1
COL12A1-201ENST00000322507 RAMP1O60894 148 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 SRSF7Q16629 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL12A1-201ENST00000322507 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 KLF14Q8TD94 323 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 EREGO14944 169 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 SIVA1O15304 175 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 NDUFC1O43677 76 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-201ENST00000322507 R3HDMLQ9H3Y0 253 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM14DPA8MWL7 114 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 CEACAM1P13688 526 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 MYO18BQ8IUG5 2567 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 A0A1B0GX51 115 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 SCTP09683 121 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM187Q14656 261 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-201ENST00000322507 PCNX3Q9H6A9 2034 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 IGKV1-8A0A0C4DH67 115 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms