RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 WIPF2Q8TF74 440 aaPredicted RBP17.81■□□□□ 0.44
PNKP-201ENST00000322344 NEU4Q8WWR8 484 aaPredicted RBP17.81■□□□□ 0.44
PNKP-201ENST00000322344 IGHV3-21A0A0B4J1V1 117 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 I3L2K1 104 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 M0R1W7 72 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 TIMM23O14925 209 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 IGLC1P0CG04 106 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 HIST1H1EP10412 219 aaKnown RBP17.8■□□□□ 0.44
PNKP-201ENST00000322344 C5orf17Q8NAS9 161 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 TMEM190Q8WZ59 177 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 ZNF331Q9NQX6 463 aaPredicted RBP17.8■□□□□ 0.44
PNKP-201ENST00000322344 RAXQ9Y2V3 346 aa17.8■□□□□ 0.44
PNKP-201ENST00000322344 GNG5P63218 68 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 USF2Q15853 346 aaPredicted RBP17.79■□□□□ 0.44
PNKP-201ENST00000322344 NUDT10Q8NFP7 164 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 NUDT11Q96G61 164 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 ATG101Q9BSB4 218 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 MRPL54Q6P161 138 aaKnown RBP17.79■□□□□ 0.44
PNKP-201ENST00000322344 WNT10AQ9GZT5 417 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 C7orf69Q9H7B7 122 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 TMEM14CQ9P0S9 112 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 NAV3Q8IVL0 2385 aa17.79■□□□□ 0.44
PNKP-201ENST00000322344 ATMQ13315 3056 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 CNIH1O95406 144 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 SLC35B1P78383 322 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 FMC1Q96HJ9 113 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 GPR82Q96P67 336 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 GNB4Q9HAV0 340 aa17.78■□□□□ 0.44
PNKP-201ENST00000322344 NBR2O15453 112 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 PSG1P11464 419 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 MMDQ15546 238 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 C11orf71Q6IPW1 123 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 FAM168AQ92567 244 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 RASL11BQ9BPW5 248 aa17.77■□□□□ 0.44
PNKP-201ENST00000322344 BRS3P32247 399 aa17.77■□□□□ 0.43
PNKP-201ENST00000322344 NDUFAF3Q9BU61 184 aa17.77■□□□□ 0.43
PNKP-201ENST00000322344 ZMAT5Q9UDW3 170 aaKnown RBP17.77■□□□□ 0.43
PNKP-201ENST00000322344 PIEZO2Q9H5I5 2752 aa17.77■□□□□ 0.43
PNKP-201ENST00000322344 TOMM40O96008 361 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 CA1P00915 261 aaPredicted RBP17.76■□□□□ 0.43
PNKP-201ENST00000322344 APCSP02743 223 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 LYZP61626 148 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 ARF6P62330 175 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 LDLRAD2Q5SZI1 272 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 UNQ6494/PRO21346Q6UXR6 183 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 NPBQ8NG41 125 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 TSKUQ8WUA8 353 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 CFHR4Q92496 578 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 SSBP3Q9BWW4 388 aaPredicted RBP17.76■□□□□ 0.43
PNKP-201ENST00000322344 SAMD10Q9BYL1 202 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 MALRD1Q5VYJ5 2156 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 POLEQ07864 2286 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 LOC105371242A0A075B767 164 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 CDSNQ15517 529 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 ZNF600Q6ZNG1 722 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 Q6ZWC4 215 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 RBM14Q96PK6 669 aaKnown RBP17.76■□□□□ 0.43
PNKP-201ENST00000322344 Q9H3A6 140 aa17.76■□□□□ 0.43
PNKP-201ENST00000322344 GSX1Q9H4S2 264 aaPredicted RBP17.76■□□□□ 0.43
PNKP-201ENST00000322344 ODF3BA8MYP8 253 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 BMPR1BO00238 502 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 NDUFA3O95167 84 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 SNRPCP09234 159 aaKnown RBP17.75■□□□□ 0.43
PNKP-201ENST00000322344 PRTN3P24158 256 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 C1orf194Q5T5A4 169 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 HSPB9Q9BQS6 159 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 MLST8Q9BVC4 326 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 OTORQ9NRC9 128 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 PTPRQQ9UMZ3 2332 aa17.75■□□□□ 0.43
PNKP-201ENST00000322344 LBHQ53QV2 105 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 PRR27Q6MZM9 219 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 NUP35Q8NFH5 326 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 TMEM68Q96MH6 324 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 SLC25A39Q9BZJ4 359 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 ZNF492Q9P255 531 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 PTPRZ1P23471 2315 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 ZNF705FA8MVS1 300 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 F2Z2F3 143 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 LY6HO94772 140 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 TCRAP04437 139 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 ZNF705DP0CH99 300 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 ZNF705BP0CI00 300 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 ATP5L2Q7Z4Y8 100 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 SIGLECL1Q8N7X8 197 aa17.74■□□□□ 0.43
PNKP-201ENST00000322344 MRPL27Q9P0M9 148 aaKnown RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 POLR3KQ9Y2Y1 108 aaPredicted RBP17.74■□□□□ 0.43
PNKP-201ENST00000322344 LTAP01374 205 aa17.73■□□□□ 0.43
PNKP-201ENST00000322344 KIAA1644Q3SXP7 199 aa17.73■□□□□ 0.43
PNKP-201ENST00000322344 RNF24Q9Y225 148 aa17.73■□□□□ 0.43
PNKP-201ENST00000322344 K7EIM0 57 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 ZNF253O75346 499 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 SRIP30626 198 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 GPR6P46095 362 aaPredicted RBP17.72■□□□□ 0.43
PNKP-201ENST00000322344 CT83Q5H943 113 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 C1orf122Q6ZSJ8 110 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 LHFPL4Q7Z7J7 247 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 KCNS1Q96KK3 526 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 TBX15Q96SF7 602 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 RPH3ALQ9UNE2 315 aa17.72■□□□□ 0.43
PNKP-201ENST00000322344 HILPDAQ9Y5L2 63 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms