RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OTORQ9NRC9 128 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV1D-13A0A0B4J2D9 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV3-11P04433 115 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV1-13P0DP09 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 HGFACQ04756 655 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 SRSF1Q07955 248 aaKnown RBP eCLIP5.9□□□□□ -1.473e-7■□□□□ 10.9
SMC1A-201ENST00000322213 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 DEPPQ9NTK1 212 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 TSSC4Q9Y5U2 329 aaPredicted RBP5.9□□□□□ -1.47
SMC1A-201ENST00000322213 A0A1B0GUS0 222 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE12JA6NER3 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 LILRA1O75019 489 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE7O76087 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE12FP0CL80 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE12GP0CL81 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE12IP0CL82 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 GAGE4Q13068 117 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 C11orf68Q9H3H3 251 aaKnown RBP5.9□□□□□ -1.47
SMC1A-201ENST00000322213 CALYQ9NYX4 217 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 PRSS8Q16651 343 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 PPDPFLQ8WWR9 84 aa5.9□□□□□ -1.47
SMC1A-201ENST00000322213 TRAV2A0A0B4J234 112 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 SMIM27A0A1W2PRY6 76 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 SRFP11831 508 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 MYF5P13349 255 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 TMEM14EPQ6UXP3 125 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 Q6ZS49 121 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 USP9XQ93008 2570 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 F2Z2F3 143 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 FCGR2BP31994 310 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 ID1P41134 155 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 SPSB3Q6PJ21 355 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 ARPC1AQ92747 370 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 MUC6Q6W4X9 2439 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 PIEZO1Q92508 2521 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 SS18L1O75177 396 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 C16orf92Q96LL3 132 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV1-9A0A0C4DH69 117 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 AKAP13Q12802 2813 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 MLNRO43193 412 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 NUP37Q8NFH4 326 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 C17orf98A8MV24 154 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 KIR3DL3Q8N743 410 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 FOXA2Q9Y261 457 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 SH2D7A6NKC9 451 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 ACP7Q6ZNF0 438 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 PILRBQ9UKJ0 227 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 PFN1P07737 140 aaKnown RBP5.89□□□□□ -1.47
SMC1A-201ENST00000322213 WFDC8Q8IUA0 241 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 C18orf32Q8TCD1 76 aa5.89□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV1D-8A0A087WSZ0 117 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 TCRBV4S1A1TA0A5B7 111 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 FAM157AC9JC47 383 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 NAPSAO96009 420 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 CT83Q5H943 113 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 RNF7Q9UBF6 113 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 TREML4Q6UXN2 200 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 C5orf24Q7Z6I8 188 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 LOXL2Q9Y4K0 774 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 ANKRD11Q6UB99 2663 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-201ENST00000322213 TM4SF5O14894 197 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 HCP5Q6MZN7 132 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 C1RLQ9NZP8 487 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 SIT1Q9Y3P8 196 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 RFNGQ9Y644 331 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 CCL11P51671 97 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 RPL39P5Q59GN2 51 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 LHFPL4Q7Z7J7 247 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 CCL17Q92583 94 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 CHAC1Q9BUX1 264 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 IFI27L2Q9H2X8 130 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 FNDC10F2Z333 226 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 TGFAP01135 160 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 TMEM101Q96IK0 257 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 ANAPC10Q9UM13 185 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 IGHV3-21A0A0B4J1V1 117 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 ZNF815PA8K554 130 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 SIVA1O15304 175 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 VKORC1Q9BQB6 163 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 RPL27AP46776 148 aaKnown RBP5.88□□□□□ -1.47
SMC1A-201ENST00000322213 CCDC144NLQ6NUI1 221 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
SMC1A-201ENST00000322213 SLC25A39Q9BZJ4 359 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-201ENST00000322213 MUC22E2RYF6 1773 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-201ENST00000322213 TRGV8A0A0C4DH27 118 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 D6R8Y8 96 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 SPINK2P20155 84 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 LHX8Q68G74 356 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 REPIN1Q9BWE0 567 aaKnown RBP5.87□□□□□ -1.47
SMC1A-201ENST00000322213 B5MCH6 92 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 REG1BP48304 166 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 GNG5P63218 68 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 OSR1Q8TAX0 266 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms