RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 H2AFB1P0C5Y9 115 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 ZNF726P1Q15940 193 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 FAM122CQ6P4D5 195 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 OR51G1Q8NGK1 321 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 OR1L4Q8NGR5 311 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 GATAD1Q8WUU5 269 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 PFDN5Q99471 154 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 MAST4O15021 2626 aa15.25■□□□□ 0.03
CCDC71-201ENST00000321895 CTXND1A0A1B0GTU2 59 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 IGHV3-11P01762 117 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 CDC34P49427 236 aaPredicted RBP15.24■□□□□ 0.03
CCDC71-201ENST00000321895 ZNF491Q8N8L2 437 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 LYPD6BQ8NI32 183 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 Q8WTZ3 238 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 SLC25A22Q9H936 323 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 ELOA3CA0A087WX78 387 aaPredicted RBP15.24■□□□□ 0.03
CCDC71-201ENST00000321895 A0A1W2PPV4 95 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 COX7A2P2O60397 106 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 OR2C1O95371 312 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 RHOBP62745 196 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 OR5AU1Q8NGC0 362 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 OR4X2Q8NGF9 303 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 OR4F5Q8NH21 305 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 WIPF2Q8TF74 440 aaPredicted RBP15.24■□□□□ 0.03
CCDC71-201ENST00000321895 MBD3L1Q8WWY6 194 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 DNAJC4Q9NNZ3 241 aa15.24■□□□□ 0.03
CCDC71-201ENST00000321895 OR5G3P0C626 314 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 ZNF600Q6ZNG1 722 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 TMEM37Q8WXS4 190 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 RAB24Q969Q5 203 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 UBE2E2Q96LR5 201 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 RNF2Q99496 336 aa15.23■□□□□ 0.03
CCDC71-201ENST00000321895 TRAV1-1A0A0B4J248 108 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 LINC00862A6NCI5 91 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 HYPMO75409 117 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 ARL3P36405 182 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 LYZP61626 148 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 RELQ04864 619 aaPredicted RBP15.22■□□□□ 0.03
CCDC71-201ENST00000321895 NDUFA5Q16718 116 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 C10orf113Q5VZT2 155 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 SSX7Q7RTT5 188 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 OR1B1Q8NGR6 318 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 SFT2D1Q8WV19 159 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 HRH4Q9H3N8 390 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 GNB4Q9HAV0 340 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 DOK5Q9P104 306 aa15.22■□□□□ 0.03
CCDC71-201ENST00000321895 WI2-2373I1.2A0A1W2PRP0 233 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 MAP1LC3B2A6NCE7 125 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 TEX46H3BTG2 121 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 HBE1P02100 147 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 IL4P05112 153 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 ORM2P19652 201 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 FAM78BQ5VT40 261 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 PATE2Q6UY27 113 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 RNF125Q96EQ8 232 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 MRPL32Q9BYC8 188 aaKnown RBP15.21■□□□□ 0.03
CCDC71-201ENST00000321895 MAP1LC3BQ9GZQ8 125 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 SEPSECSQ9HD40 501 aaKnown RBP15.21■□□□□ 0.03
CCDC71-201ENST00000321895 MED9Q9NWA0 146 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 FUT9Q9Y231 359 aa15.21■□□□□ 0.03
CCDC71-201ENST00000321895 PPP5D1E7EU14 171 aa15.21■□□□□ 0.02
CCDC71-201ENST00000321895 PUS1Q9Y606 427 aaKnown RBP eCLIP15.21■□□□□ 0.02
CCDC71-201ENST00000321895 TRBV12-3P01733 135 aa15.2■□□□□ 0.02
CCDC71-201ENST00000321895 LCN15Q6UWW0 184 aa15.2■□□□□ 0.02
CCDC71-201ENST00000321895 PBDC1Q9BVG4 233 aa15.2■□□□□ 0.02
CCDC71-201ENST00000321895 PEF1Q9UBV8 284 aaKnown RBP15.2■□□□□ 0.02
CCDC71-201ENST00000321895 PFDN2Q9UHV9 154 aa15.2■□□□□ 0.02
CCDC71-201ENST00000321895 ANKRD34BA5PLL1 514 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 LGALS1P09382 135 aaKnown RBP15.19■□□□□ 0.02
CCDC71-201ENST00000321895 TCTEX1D4Q5JR98 221 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 ZNF414Q96IQ9 312 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 MRPL27Q9P0M9 148 aaKnown RBP15.19■□□□□ 0.02
CCDC71-201ENST00000321895 HIGD1AQ9Y241 93 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 C2CD3Q4AC94 2353 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 CLPSL1A2RUU4 121 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 SPATA31B1PQ5VZV4 182 aa15.19■□□□□ 0.02
CCDC71-201ENST00000321895 NUDT19A8MXV4 375 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 BMPR1BO00238 502 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 HMGB3O15347 200 aaKnown RBP15.18■□□□□ 0.02
CCDC71-201ENST00000321895 GGCTO75223 188 aaKnown RBP15.18■□□□□ 0.02
CCDC71-201ENST00000321895 STAG3L2P0CL84 134 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 STAG3L3P0CL85 134 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 CDX1P47902 265 aaPredicted RBP15.18■□□□□ 0.02
CCDC71-201ENST00000321895 SRSF2Q01130 221 aaKnown RBP15.18■□□□□ 0.02
CCDC71-201ENST00000321895 TOMM20LQ6UXN7 152 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 IL34Q6ZMJ4 242 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 MIR17HGQ75NE6 70 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 LINC00305Q7Z4B0 112 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 S100A7AQ86SG5 101 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 WFDC12Q8WWY7 111 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 UHRF2Q96PU4 802 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 OR5B12Q96R08 314 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 ZFAND3Q9H8U3 227 aa15.18■□□□□ 0.02
CCDC71-201ENST00000321895 TEP1Q99973 2627 aaKnown RBP15.17■□□□□ 0.02
CCDC71-201ENST00000321895 NIPBLQ6KC79 2804 aaeCLIP15.17■□□□□ 0.02
CCDC71-201ENST00000321895 IGHV3-35A0A0C4DH35 117 aa15.17■□□□□ 0.02
CCDC71-201ENST00000321895 A0A1B0GV50 99 aa15.17■□□□□ 0.02
CCDC71-201ENST00000321895 EIF3GO75821 320 aaKnown RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms