RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CST9LQ9H4G1 147 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 C2CD3Q4AC94 2353 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 PEX7O00628 323 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 NKX2-8O15522 239 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 MTURNQ8N3F0 131 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 CCL17Q92583 94 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 DSCAMO60469 2012 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 C15orf65H3BRN8 121 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 ERHP84090 104 aaKnown RBP11.56□□□□□ -0.56
PABPC1-201ENST00000318607 SLC25A33Q9BSK2 321 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 OSTCQ9NRP0 149 aa11.56□□□□□ -0.56
PABPC1-201ENST00000318607 MRPL36Q9P0J6 103 aaKnown RBP11.56□□□□□ -0.56
PABPC1-201ENST00000318607 VWC2LB2RUY7 222 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 H3BUT2 72 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 LINC00322Q6ZN03 302 aaPredicted RBP11.55□□□□□ -0.56
PABPC1-201ENST00000318607 ORAOV1Q8WV07 137 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 CEP192Q8TEP8 1941 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 PSG9Q00887 426 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 RTL8BQ17RB0 113 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 OR10J3Q5JRS4 329 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
PABPC1-201ENST00000318607 TEX50A0A1B0GTY4 177 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 MGST3O14880 152 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 RBP4P02753 201 aa11.55□□□□□ -0.56
PABPC1-201ENST00000318607 TRAV8-6A0A0B4J262 113 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 GAGE12BA1L429 117 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 GAGE10A6NGK3 116 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 IQCF6A8MYZ5 107 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 ARF6P62330 175 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 C9orf106Q8NAJ2 232 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 TNFRSF14Q92956 283 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 ZNF430Q9H8G1 570 aaPredicted RBP11.54□□□□□ -0.56
PABPC1-201ENST00000318607 C9JCJ5 164 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 FCER1GP30273 86 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
PABPC1-201ENST00000318607 PLGLAQ15195 96 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
PABPC1-201ENST00000318607 OCIAD2Q56VL3 154 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 RPRMLQ8N4K4 120 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 SARAFQ96BY9 339 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 TTTY13Q9BZ97 58 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
PABPC1-201ENST00000318607 ANKHD1Q8IWZ3 2542 aaKnown RBP11.53□□□□□ -0.56
PABPC1-201ENST00000318607 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.56
PABPC1-201ENST00000318607 ACP1P24666 158 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 PRR20EP86478 221 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 PRR20CP86479 221 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 PRR20DP86480 221 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 PRR20BP86481 221 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 PRR20AP86496 221 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 TRIP6Q15654 476 aaKnown RBP11.52□□□□□ -0.56
PABPC1-201ENST00000318607 RUSC1-AS1Q66K80 236 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 TXNDC17Q9BRA2 123 aa11.52□□□□□ -0.56
PABPC1-201ENST00000318607 SORL1Q92673 2214 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 C7orf71A4D174 169 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 APOHP02749 345 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-201ENST00000318607 FAM222BQ8WU58 562 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 THYN1Q9P016 225 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV1-69-2A0A0G2JMI3 117 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-201ENST00000318607 NRN1LQ496H8 165 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
PABPC1-201ENST00000318607 K7EP13 123 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 LOXL3P58215 753 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 FAM90A1Q86YD7 464 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 SS18L1O75177 396 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-201ENST00000318607 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 HBBP68871 147 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 FAM106AQ4KMX7 169 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 NBEAP1P0C6P0 100 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 TNFAIP6P98066 277 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-201ENST00000318607 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 LCNL1Q6ZST4 164 aa11.51□□□□□ -0.57
PABPC1-201ENST00000318607 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-201ENST00000318607 EIF4EBP1Q13541 118 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-201ENST00000318607 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 A0A1W2PNU3 283 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-201ENST00000318607 C2orf70A6NJV1 201 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 PRSS46E5RG02 174 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms