RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RYR2Q92736 4967 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 FAM90A26D6RGX4 464 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 BUB3O43684 328 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
TPM1-203ENST00000317516 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 TRPT1Q86TN4 253 aaKnown RBP12.98□□□□□ -0.33
TPM1-203ENST00000317516 CIB3Q96Q77 187 aaPredicted RBP12.98□□□□□ -0.33
TPM1-203ENST00000317516 NRN1Q9NPD7 142 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 TMED3Q9Y3Q3 217 aa12.98□□□□□ -0.33
TPM1-203ENST00000317516 KNCNA6PVL3 124 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 PITX3O75364 302 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 SFT2D2O95562 160 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 INPP1P49441 399 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 GAMTQ14353 236 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 ZNF79Q15937 498 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 PSMG4Q5JS54 123 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 OR8G2PQ6IF36 304 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 CCDC190Q86UF4 302 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
TPM1-203ENST00000317516 SACSQ9NZJ4 4579 aa12.96□□□□□ -0.33
TPM1-203ENST00000317516 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.33
TPM1-203ENST00000317516 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.33
TPM1-203ENST00000317516 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
TPM1-203ENST00000317516 CENPSQ8N2Z9 138 aa12.96□□□□□ -0.33
TPM1-203ENST00000317516 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
TPM1-203ENST00000317516 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
TPM1-203ENST00000317516 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
TPM1-203ENST00000317516 LYSTQ99698 3801 aa12.94□□□□□ -0.34
TPM1-203ENST00000317516 IAPPP10997 89 aa12.94□□□□□ -0.34
TPM1-203ENST00000317516 MIFP14174 115 aa12.94□□□□□ -0.34
TPM1-203ENST00000317516 NANOS2P60321 138 aaKnown RBP12.94□□□□□ -0.34
TPM1-203ENST00000317516 UBE2MP61081 183 aaKnown RBP12.94□□□□□ -0.34
TPM1-203ENST00000317516 PPP1R1AQ13522 171 aa12.94□□□□□ -0.34
TPM1-203ENST00000317516 NAP1L6A6NFF2 107 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 DEFB4AO15263 64 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 SYNGR2O43760 224 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
TPM1-203ENST00000317516 HOXB5P09067 269 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
TPM1-203ENST00000317516 ZNF90Q03938 601 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 C1orf194Q5T5A4 169 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 PPP1R14BQ96C90 147 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 TRGV9Q99603 122 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
TPM1-203ENST00000317516 RBM38Q9H0Z9 239 aaKnown RBP12.93□□□□□ -0.34
TPM1-203ENST00000317516 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 ID1P41134 155 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 LYZP61626 148 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 GGNBP1Q5YKI7 109 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 TRIQKQ629K1 86 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 SRRQ9GZT4 340 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
TPM1-203ENST00000317516 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
TPM1-203ENST00000317516 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 WRBO00258 174 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 S100A7P31151 101 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
TPM1-203ENST00000317516 Q8NAQ8 132 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 TBC1D24Q9ULP9 559 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
TPM1-203ENST00000317516 IGHV4-28A0A0C4DH34 117 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 CENPXA8MT69 81 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 H3BMM0 161 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 IFNA21P01568 189 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 C4BPBP20851 252 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 TCTAP57738 103 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 OR2F1Q13607 317 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 SPANXN5Q5MJ07 72 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 COQ8AQ8NI60 647 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 CLEC5AQ9NY25 188 aa12.9□□□□□ -0.34
TPM1-203ENST00000317516 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
TPM1-203ENST00000317516 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
TPM1-203ENST00000317516 NDUFB6O95139 128 aa12.89□□□□□ -0.35
TPM1-203ENST00000317516 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
TPM1-203ENST00000317516 THAP8Q8NA92 274 aa12.89□□□□□ -0.35
TPM1-203ENST00000317516 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
TPM1-203ENST00000317516 RBMY1A1P0DJD3 496 aaKnown RBP12.88□□□□□ -0.35
TPM1-203ENST00000317516 RBMY1CP0DJD4 496 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 RBMY1FQ15415 496 aaKnown RBP12.88□□□□□ -0.35
TPM1-203ENST00000317516 BAK1Q16611 211 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 SLC45A2Q9UMX9 530 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 X6R8D5 127 aa12.88□□□□□ -0.35
TPM1-203ENST00000317516 PSMB3P49720 205 aa12.87□□□□□ -0.35
TPM1-203ENST00000317516 ID3Q02535 119 aa12.87□□□□□ -0.35
TPM1-203ENST00000317516 SPATA31B1PQ5VZV4 182 aa12.87□□□□□ -0.35
TPM1-203ENST00000317516 BPIFCQ8NFQ6 507 aa12.87□□□□□ -0.35
TPM1-203ENST00000317516 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
TPM1-203ENST00000317516 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
TPM1-203ENST00000317516 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 OR4E1P0C645 316 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 GALR1P47211 349 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms