RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 A8MWP6 167 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 RAB4AP20338 218 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 HBG1P69891 147 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 HBG2P69892 147 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 SLC25A24Q6NUK1 477 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 MTORP42345 2549 aa12.65□□□□□ -0.38
TUBB3-201ENST00000315491 ZNF727A8MUV8 499 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 TRGC1P0CF51 173 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 SLC38A11Q08AI6 406 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 Q6ZSV7 163 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
TUBB3-201ENST00000315491 PACRGQ96M98 296 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-201ENST00000315491 CORTO00230 105 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 HSPB1P04792 205 aaKnown RBP12.64□□□□□ -0.39
TUBB3-201ENST00000315491 GFI1BQ5VTD9 330 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
TUBB3-201ENST00000315491 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-201ENST00000315491 IGLV11-55A0A075B6I3 123 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 TGIF2-C20orf24A0A0A6YYL0 155 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 CYB5BO43169 146 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 SOX15O60248 233 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 TRGC2P03986 189 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 FABP4P15090 132 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
TUBB3-201ENST00000315491 FHITP49789 147 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 RND2P52198 227 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 DLK1P80370 383 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 AKR1C8PQ5T2L2 129 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 ZNF343Q6P1L6 599 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 SPSB3Q6PJ21 355 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 OR10G4Q8NGN3 311 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 FAM213BQ8TBF2 198 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 RARRES2Q99969 163 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 TMEM242Q9NWH2 141 aa12.63□□□□□ -0.39
TUBB3-201ENST00000315491 PHOX2AO14813 284 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 CFHR3Q02985 330 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 CD69Q07108 199 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 OR2T6Q8NHC8 308 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
TUBB3-201ENST00000315491 ATP5SQ99766 215 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 HIST1H2BLQ99880 126 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 ZNF355PQ9NSJ1 428 aa12.62□□□□□ -0.39
TUBB3-201ENST00000315491 DFFBO76075 338 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 OPRK1P41145 380 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 KLK9Q2XQG4 91 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 TMEM182Q6ZP80 229 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-201ENST00000315491 FRZBQ92765 325 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 FAM210BQ96KR6 192 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 TMEM147Q9BVK8 224 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 SH3BGRL3Q9H299 93 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 FNDC4Q9H6D8 234 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-201ENST00000315491 SERTAD4Q9NUC0 356 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 KLK9Q9UKQ9 250 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 NSD1Q96L73 2696 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-201ENST00000315491 MT-CO2P00403 227 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 MLANAQ16655 118 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 NIPSNAP3BQ9BS92 247 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 THYN1Q9P016 225 aa12.61□□□□□ -0.39
TUBB3-201ENST00000315491 H3BUA1 57 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 I3L2K1 104 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 OR2J3O76001 311 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 ICAM4Q14773 271 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 ETFRF1Q6IPR1 90 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 TMEM183AQ8IXX5 376 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 CACNG8Q8WXS5 425 aa12.6□□□□□ -0.39
TUBB3-201ENST00000315491 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 K7EIM0 57 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 NDUFB8O95169 186 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 BRI3O95415 125 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 GCGP01275 180 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 SLC35B1P78383 322 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 ZNF266Q14584 549 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 HAGHQ16775 308 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 VWC2Q2TAL6 325 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 MS4A10Q96PG2 267 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 FBXL7Q9UJT9 491 aa12.59□□□□□ -0.39
TUBB3-201ENST00000315491 TRBV24-1A0A075B6N3 115 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 PSMB11A5LHX3 300 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 FNDC10F2Z333 226 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 IGLV1-40P01703 118 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 GZMBP10144 247 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 RHOGP84095 191 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 SRSF2Q01130 221 aaKnown RBP12.58□□□□□ -0.39
TUBB3-201ENST00000315491 PNRC1Q12796 327 aaPredicted RBP12.58□□□□□ -0.39
TUBB3-201ENST00000315491 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.39
TUBB3-201ENST00000315491 PDZD11Q5EBL8 140 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 COA6Q5JTJ3 125 aaKnown RBP12.58□□□□□ -0.39
TUBB3-201ENST00000315491 DPPA3Q6W0C5 159 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 ZNF329Q86UD4 541 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 HSD17B11Q8NBQ5 300 aa12.58□□□□□ -0.39
TUBB3-201ENST00000315491 UBE2L5PA0A1B0GUS4 154 aa12.58□□□□□ -0.4
TUBB3-201ENST00000315491 NDUFA7O95182 113 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms