RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CLEC12BQ2HXU8 276 aa14.47□□□□□ -0.09
CCDC43-201ENST00000315286 C9JCJ5 164 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 S100A6P06703 90 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 CD99P14209 185 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 LYZP61626 148 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 SFRP2Q96HF1 295 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 HSPB9Q9BQS6 159 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 PYGO2Q9BRQ0 406 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 C5orf52A6NGY3 159 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 K7EN84 100 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 HLA-DRB1P01911 266 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 TRGC2P03986 189 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 RD3LP0DJH9 198 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 S100PP25815 95 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 LEMD1Q68G75 181 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 STXBP6Q8NFX7 210 aa14.46□□□□□ -0.09
CCDC43-201ENST00000315286 ZFHX3Q15911 3703 aa14.46□□□□□ -0.1
CCDC43-201ENST00000315286 HIGD1AQ9Y241 93 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 IGHV1-69DA0A0B4J2H0 117 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 MDFIC2A0A1B0GVS7 189 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 A1L4Q6 167 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 IGHV1-69P01742 117 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 CENPWQ5EE01 88 aa14.45□□□□□ -0.1
CCDC43-201ENST00000315286 PPP1R2P9O14990 202 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 TEX38Q6PEX7 206 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 BRD3OSQ6XYD6 125 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 ZNF329Q86UD4 541 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 LY96Q9Y6Y9 160 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 CSMD2Q7Z408 3487 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 CENPEQ02224 2701 aa14.44□□□□□ -0.1
CCDC43-201ENST00000315286 TRAV40A0A0B4J280 105 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 COX6B1P14854 86 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 SRP14P37108 136 aaKnown RBP14.43□□□□□ -0.1
CCDC43-201ENST00000315286 GNG4P50150 75 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 BLNKQ8WV28 456 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 MRPL27Q9P0M9 148 aaKnown RBP14.43□□□□□ -0.1
CCDC43-201ENST00000315286 A0A1W2PPQ1 181 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 NDUFB8O95169 186 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 GP9P14770 177 aa14.43□□□□□ -0.1
CCDC43-201ENST00000315286 RANP62826 216 aaKnown RBP14.43□□□□□ -0.1
CCDC43-201ENST00000315286 SLC25A39Q9BZJ4 359 aaPredicted RBP14.43□□□□□ -0.1
CCDC43-201ENST00000315286 F8W735 103 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-201ENST00000315286 OR2J3O76001 311 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 FABP1P07148 127 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 NBEAP1P0C6P0 100 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 MYCNOSP40205 109 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 AKR1D1P51857 326 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 MFAP4P55083 255 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 FAM3BP58499 235 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-201ENST00000315286 OR10G8Q8NGN5 311 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 FBN2P35556 2912 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 SH2D7A6NKC9 451 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-201ENST00000315286 GNG7O60262 68 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 GGCTO75223 188 aaKnown RBP14.42□□□□□ -0.1
CCDC43-201ENST00000315286 TOMM40O96008 361 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 MSMBP08118 114 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 IGHV4-38-2P0DP08 117 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 OR5I1Q13606 314 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 ZNF491Q8N8L2 437 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 SGMS2Q8NHU3 365 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 LINC00479Q96M42 142 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 THYN1Q9P016 225 aa14.42□□□□□ -0.1
CCDC43-201ENST00000315286 ANKRD17O75179 2603 aaKnown RBP14.41□□□□□ -0.1
CCDC43-201ENST00000315286 AP4M1O00189 453 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 ATP6V0E1O15342 81 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 FABP9Q0Z7S8 132 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 KCNIP4Q6PIL6 250 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 TMUB1Q9BVT8 246 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 SRD5A3Q9H8P0 318 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 C21orf62Q9NYP8 219 aa14.41□□□□□ -0.1
CCDC43-201ENST00000315286 TRAV30A0A087WSZ9 112 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 A0A0U1RQK1 487 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 LINC01548A6NM66 108 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 UBE2CO00762 179 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 PHOX2AO14813 284 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 TGOLN2O43493 480 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BKO60814 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 IGHV3-23P01764 117 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BJP06899 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 PAX1P15863 534 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BOP23527 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BBP33778 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BDP58876 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BCP62807 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST2H2BEQ16778 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.4□□□□□ -0.1
CCDC43-201ENST00000315286 ZNF600Q6ZNG1 722 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 PIFOQ8TCI5 191 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 FRZBQ92765 325 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BHQ93079 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 IGF2BP2-AS1Q96M15 143 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 ZNF48Q96MX3 618 aaPredicted RBP14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BNQ99877 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 HIST1H2BMQ99879 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 C7orf69Q9H7B7 122 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 POLQO75417 2590 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 H3BTX0 84 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 IGLV2-8P01709 118 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 ECSCRQ19T08 205 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 Q56UQ5 140 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms