RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GZMBP10144 247 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 GFRA1P56159 465 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 RNF152Q8N8N0 203 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 CSN3P07498 182 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 RIPPLY3P57055 190 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 VWC2Q2TAL6 325 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 DTX2Q86UW9 622 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
COL6A5-202ENST00000312481 ITLN1Q8WWA0 313 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
COL6A5-202ENST00000312481 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
COL6A5-202ENST00000312481 SPXQ9BT56 116 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 APOHP02749 345 aaPredicted RBP7.32□□□□□ -1.24
COL6A5-202ENST00000312481 ZNF562Q6V9R5 426 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 IFI27L1Q96BM0 104 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 GAGE13Q4V321 117 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 PEMTQ9UBM1 199 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 CSRP1P21291 193 aaKnown RBP7.32□□□□□ -1.24
COL6A5-202ENST00000312481 VKORC1L1Q8N0U8 176 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 COX11Q9Y6N1 276 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 PMVKQ15126 192 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 IGFBPL1Q8WX77 278 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 PLA2G3Q9NZ20 509 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 A8MWV9 139 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
COL6A5-202ENST00000312481 RBAKDNA6NC62 111 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 IGKCP01834 107 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 CECR9P0C854 216 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 HGFACQ04756 655 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 DEFB123Q8N688 67 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 ZNF502Q8TBZ5 544 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 GPR179Q6PRD1 2367 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 TECTAO75443 2155 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 SPINK4O60575 86 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 ZFAND6Q6FIF0 208 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 NUDT11Q96G61 164 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 NPIPB3Q92617 1050 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 MEGF9Q9H1U4 602 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 CGAP01215 116 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 SAA2P0DJI9 122 aaPredicted RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 PSG7Q13046 419 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 RNASE6Q93091 150 aaKnown RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 MRPL53Q96EL3 112 aaKnown RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 IGKV3-15P01624 115 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 TMEM155Q4W5P6 130 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 FXYD3Q14802 87 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 A0A1B0GWJ7 208 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 MESP2Q0VG99 397 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 C9orf50Q5SZB4 431 aa7.31□□□□□ -1.24
COL6A5-202ENST00000312481 ZCCHC24Q8N2G6 241 aaKnown RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 ZNF784Q8NCA9 323 aaPredicted RBP7.31□□□□□ -1.24
COL6A5-202ENST00000312481 CD40P25942 277 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 RHODO00212 210 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 CCL2P13500 99 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 GGNQ86UU5 652 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 E9PLN8 166 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 C1QL2Q7Z5L3 287 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 VKORC1Q9BQB6 163 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 ATRAIDQ6UW56 229 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 HAX1O00165 279 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 RRHO14718 337 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 CEACAM4O75871 244 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
COL6A5-202ENST00000312481 C1QCP02747 245 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 CCL4P13236 92 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 COX7A1P24310 79 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 WNT5AP41221 380 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 IL15RAQ13261 267 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 COQ2Q96H96 371 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 SMIM27A0A1W2PRY6 76 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 TEX43Q6ZNM6 134 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 GLMPQ8WWB7 406 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 RPP25Q9BUL9 199 aaKnown RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ESDP10768 282 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 KLF5Q13887 457 aaPredicted RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 CSRP2Q16527 193 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 CCL13Q99616 98 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 TNFRSF18Q9Y5U5 241 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ACYP1P07311 99 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 LOXL3P58215 753 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 WFDC1Q9HC57 220 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 C17orf98A8MV24 154 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 VCYO14598 125 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 HOXA3O43365 443 aaPredicted RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ATXN8Q156A1 80 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms