RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 A0A1B0GWJ7 208 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIGD1CA8MV81 97 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 M0QZK8 103 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 DERL1Q9BUN8 251 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BKO60814 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BJP06899 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BOP23527 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BBP33778 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BDP58876 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BCP62807 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST2H2BEQ16778 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 LINC01551Q86U37 167 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 CIARTQ8N365 385 aaPredicted RBP9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BHQ93079 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 TRGV9Q99603 122 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BNQ99877 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H2BMQ99879 126 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 MMP23AO75900 390 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 CXCL1P09341 107 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 AREGP15514 252 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 FNDC10F2Z333 226 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 G0S2P27469 103 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 TCF24Q7RTU0 167 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 TCF23Q7RTU1 214 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 LHFPL4Q7Z7J7 247 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 BPESC1Q9GZL8 116 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 TMEM170AQ8WVE7 144 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 GGCTO75223 188 aaKnown RBP9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 OR5AN1Q8NGI8 311 aa9.28□□□□□ -0.92
PCDHGC3-201ENST00000308177 A0A1W2PPI3 338 aa9.27□□□□□ -0.92
PCDHGC3-201ENST00000308177 WISP2O76076 250 aa9.27□□□□□ -0.92
PCDHGC3-201ENST00000308177 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.92
PCDHGC3-201ENST00000308177 LINC00527Q9UJ94 153 aa9.27□□□□□ -0.92
PCDHGC3-201ENST00000308177 SMAD7O15105 426 aaKnown RBP9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 TCAPO15273 167 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 SNRPD3P62318 126 aaKnown RBP9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 FAM90A2PQ658T7 463 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 ZNF833PQ6ZTB9 187 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 BEND2Q8NDZ0 799 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 SOX21Q9Y651 276 aaPredicted RBP9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 FOLR2P14207 255 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 C1QL4Q86Z23 238 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 IFITM10A6NMD0 228 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 NCOR2Q9Y618 2525 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 PIEZO2Q9H5I5 2752 aa9.27□□□□□ -0.93
PCDHGC3-201ENST00000308177 BTF3P20290 206 aaKnown RBP9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 C15orf32Q32M92 178 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 CEP192Q8TEP8 1941 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 FBLL1A6NHQ2 334 aaKnown RBP9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 PMS2P5A8MQ11 134 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 C9JCJ5 164 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 TMEM219Q86XT9 240 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 SLC25A39Q9BZJ4 359 aaPredicted RBP9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 DMRT1Q9Y5R6 373 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 KIR3DL3Q8N743 410 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 MOB4Q9Y3A3 225 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 IGF2RP11717 2491 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 DDTP30046 118 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 Q6AWC8 147 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 LINC00311Q8N616 119 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 NDUFA4L2Q9NRX3 87 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
PCDHGC3-201ENST00000308177 MUC21A0A0G2JKD1 596 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 MUC21A0A140T8X8 626 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 HAX1O00165 279 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 DLX1P56177 255 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 MUC21Q5SSG8 566 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 NOTCH2Q04721 2471 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 NPFFO15130 113 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 IGKV3-20P01619 116 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 TSPOP30536 169 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 DSCR9P59020 149 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 SPATA45Q537H7 98 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 ZNF841Q6ZN19 808 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 HAPLN4Q86UW8 402 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 TRAV41A0A0B4J266 112 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 TBL2Q9Y4P3 447 aaKnown RBP9.25□□□□□ -0.93
PCDHGC3-201ENST00000308177 FOXL1Q12952 345 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 FAM159AQ6UWV7 190 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 NPFFR1Q9GZQ6 430 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms