RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 PMCHL2Q9BQD1 86 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 CNOT1A5YKK6 2376 aaKnown RBP9.47□□□□□ -0.89
FOXP4-201ENST00000307972 CACNA1GO43497 2377 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 IGHV1-46P01743 117 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 ZNF138P52744 262 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 LINC00173Q6ZV60 143 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 NCOR1P1Q9H4R4 102 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 IGHV3-72A0A0B4J1Y9 119 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 ZNF788Q6ZQV5 615 aa9.47□□□□□ -0.89
FOXP4-201ENST00000307972 CEACAM8P31997 349 aaPredicted RBP9.46□□□□□ -0.89
FOXP4-201ENST00000307972 TIMM23BQ5SRD1 257 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 LINC00312Q9Y6C7 94 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 PSMB11A5LHX3 300 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 TOMM40O96008 361 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 OR4F17Q8NGA8 305 aa9.46□□□□□ -0.89
FOXP4-201ENST00000307972 TECTAO75443 2155 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.9
FOXP4-201ENST00000307972 VWC2LB2RUY7 222 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 LIPFP07098 398 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 TMEM30BQ3MIR4 351 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 C12orf54Q6X4T0 127 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
FOXP4-201ENST00000307972 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 PRNTQ86SH4 94 aa9.46□□□□□ -0.9
FOXP4-201ENST00000307972 MRPL36Q9P0J6 103 aaKnown RBP9.46□□□□□ -0.9
FOXP4-201ENST00000307972 ZNF841Q6ZN19 808 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 ZCCHC24Q8N2G6 241 aaKnown RBP9.45□□□□□ -0.9
FOXP4-201ENST00000307972 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
FOXP4-201ENST00000307972 TANC2Q9HCD6 1990 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 IGHV2-70DA0A0C4DH43 119 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 FAM87AP0C7U9 286 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 LYZP61626 148 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 DEFB109BQ30KR1 87 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 Q9H3A6 140 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 DYSFO75923 2080 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 MUC21A0A140T8X8 626 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 TNFRSF1AP19438 455 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 RBX1P62877 108 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 ZNF833PQ6ZTB9 187 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
FOXP4-201ENST00000307972 EP300Q09472 2414 aaPredicted RBP9.45□□□□□ -0.9
FOXP4-201ENST00000307972 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 SNAI2O43623 268 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 DIAPH2-AS1Q14236 149 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 FAM222BQ8WU58 562 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 CCL17Q92583 94 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
FOXP4-201ENST00000307972 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 ZNF474Q6S9Z5 364 aaPredicted RBP9.44□□□□□ -0.9
FOXP4-201ENST00000307972 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
FOXP4-201ENST00000307972 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
FOXP4-201ENST00000307972 LOC105371242A0A075B767 164 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 LOC102724200A0A096LPH7 203 aaPredicted RBP9.44□□□□□ -0.9
FOXP4-201ENST00000307972 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 GATA4P43694 442 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 GOLT1AQ6ZVE7 132 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 PRSS3P2Q8NHM4 247 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 DKK4Q9UBT3 224 aa9.44□□□□□ -0.9
FOXP4-201ENST00000307972 OR2T8A6NH00 312 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 TCRAP04437 139 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 CIARTQ8N365 385 aaPredicted RBP9.43□□□□□ -0.9
FOXP4-201ENST00000307972 FAM169BQ8N8A8 192 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 OR5AN1Q8NGI8 311 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 PCNX1Q96RV3 2341 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 IGKV1D-37A0A075B6S9 117 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 A0A087X0K7 114 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 A0A1W2PPI3 338 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 CDX4O14627 284 aaPredicted RBP9.43□□□□□ -0.9
FOXP4-201ENST00000307972 NDUFB3O43676 98 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 AMMECR1LQ6DCA0 310 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 URB1-AS1Q96HZ7 61 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 GVINP1Q7Z2Y8 2422 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 IGLV3-9A0A075B6K5 115 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
FOXP4-201ENST00000307972 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
FOXP4-201ENST00000307972 RBP4P02753 201 aa9.42□□□□□ -0.9
FOXP4-201ENST00000307972 PSG1P11464 419 aa9.42□□□□□ -0.9
FOXP4-201ENST00000307972 RPL27AP46776 148 aaKnown RBP9.42□□□□□ -0.9
FOXP4-201ENST00000307972 OR4A5Q8NH83 315 aa9.42□□□□□ -0.9
FOXP4-201ENST00000307972 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
FOXP4-201ENST00000307972 TMEM186Q96B77 213 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms