RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 IGHV4-31P0DP07 118 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 PYYP10082 97 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 KLK9Q2XQG4 91 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 MBD6Q96DN6 1003 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 PAXXQ9BUH6 204 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 DERL1Q9BUN8 251 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 THYN1Q9P016 225 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 KLK9Q9UKQ9 250 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 DOPEY2Q9Y3R5 2298 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 A6NDX4 124 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 G3V318 75 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 LY6EQ16553 131 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 KRTAP1-3Q8IUG1 177 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 C15orf54Q8N8G6 183 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 ZNF48Q96MX3 618 aaPredicted RBP17.47■□□□□ 0.39
SMAD1-201ENST00000302085 OR51M1Q9H341 326 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 FBXL7Q9UJT9 491 aa17.47■□□□□ 0.39
SMAD1-201ENST00000302085 LYZP61626 148 aa17.46■□□□□ 0.39
SMAD1-201ENST00000302085 RPL23P62829 140 aaKnown RBP17.46■□□□□ 0.39
SMAD1-201ENST00000302085 C21orf62Q9NYP8 219 aa17.46■□□□□ 0.39
SMAD1-201ENST00000302085 TENM4Q6N022 2769 aa17.46■□□□□ 0.39
SMAD1-201ENST00000302085 NAV2Q8IVL1 2488 aa17.46■□□□□ 0.39
SMAD1-201ENST00000302085 OR2C1O95371 312 aa17.46■□□□□ 0.39
SMAD1-201ENST00000302085 UBE2L3P68036 154 aaKnown RBP17.46■□□□□ 0.39
SMAD1-201ENST00000302085 TRAV30A0A087WSZ9 112 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 GNG7O60262 68 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 FABP1P07148 127 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 HIST1H1BP16401 226 aaKnown RBP17.45■□□□□ 0.38
SMAD1-201ENST00000302085 ADIRFQ15847 76 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 C16orf82Q7Z2V1 217 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 FXYD5Q96DB9 178 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 TMEM68Q96MH6 324 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 MRPL27Q9P0M9 148 aaKnown RBP17.45■□□□□ 0.38
SMAD1-201ENST00000302085 HIGD1AQ9Y241 93 aa17.45■□□□□ 0.38
SMAD1-201ENST00000302085 TOMM40O96008 361 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 IGHV3-23P01764 117 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 C11orf52Q96A22 123 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 Q96MF0 132 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 CR1P17927 2039 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 A0A1W2PRE2 83 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 YPEL3P61236 119 aaPredicted RBP17.44■□□□□ 0.38
SMAD1-201ENST00000302085 Q56UQ5 140 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 BCL6BQ8N143 479 aaPredicted RBP17.44■□□□□ 0.38
SMAD1-201ENST00000302085 YPEL4Q96NS1 127 aa17.44■□□□□ 0.38
SMAD1-201ENST00000302085 CSMD2Q7Z408 3487 aa17.43■□□□□ 0.38
SMAD1-201ENST00000302085 MDFIC2A0A1B0GVS7 189 aa17.43■□□□□ 0.38
SMAD1-201ENST00000302085 GGTLC3B5MD39 225 aa17.43■□□□□ 0.38
SMAD1-201ENST00000302085 ATF4P18848 351 aaPredicted RBP17.43■□□□□ 0.38
SMAD1-201ENST00000302085 PRSS57Q6UWY2 283 aa17.43■□□□□ 0.38
SMAD1-201ENST00000302085 HIST1H2BAQ96A08 127 aa17.43■□□□□ 0.38
SMAD1-201ENST00000302085 TRBV9A0A0B4J1U6 114 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 SUMO1P63165 101 aaKnown RBP17.42■□□□□ 0.38
SMAD1-201ENST00000302085 LEMD1Q68G75 181 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 FAM24BQ8N5W8 94 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 ZNF491Q8N8L2 437 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 VN1R17PQ8TDU5 208 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 WI2-2373I1.2A0A1W2PRP0 233 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 RNF212Q495C1 297 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 C19orf54Q5BKX5 351 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 STXBP6Q8NFX7 210 aa17.42■□□□□ 0.38
SMAD1-201ENST00000302085 SLC25A39Q9BZJ4 359 aaPredicted RBP17.42■□□□□ 0.38
SMAD1-201ENST00000302085 SNRPCP09234 159 aaKnown RBP17.41■□□□□ 0.38
SMAD1-201ENST00000302085 CRIP2P52943 208 aaPredicted RBP17.41■□□□□ 0.38
SMAD1-201ENST00000302085 RHOGP84095 191 aa17.41■□□□□ 0.38
SMAD1-201ENST00000302085 TRBV20OR9-2A0A075B6H5 130 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 CRYBB3P26998 211 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 FCGR2BP31994 310 aaPredicted RBP17.4■□□□□ 0.38
SMAD1-201ENST00000302085 DEFB112Q30KQ8 113 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 C9orf152Q5JTZ5 239 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 ZNF343Q6P1L6 599 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 TXN2Q99757 166 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 CSPG4Q6UVK1 2322 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 TRAV41A0A0B4J266 112 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 OR2T8A6NH00 312 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 MT-ND4LP03901 98 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 CTSGP08311 255 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 C15orf32Q32M92 178 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 ELOVL1Q9BW60 279 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 TMEM242Q9NWH2 141 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 LINC00527Q9UJ94 153 aa17.4■□□□□ 0.38
SMAD1-201ENST00000302085 CXorf65A6NEN9 183 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 CRYBA1P05813 215 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 GP9P14770 177 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 LINC01551Q86U37 167 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 ZNF502Q8TBZ5 544 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 RNF125Q96EQ8 232 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 AURKAIP1Q9NWT8 199 aaPredicted RBP17.39■□□□□ 0.37
SMAD1-201ENST00000302085 CSMD1Q96PZ7 3565 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 APCP25054 2843 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 PGPEP1LA6NFU8 196 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 FSHBP01225 129 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 IL4P05112 153 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 Q8WTZ3 238 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 MS4A10Q96PG2 267 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 CHRDL1Q9BU40 450 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 CTDSP1Q9GZU7 261 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 PITPNC1Q9UKF7 332 aa17.39■□□□□ 0.37
SMAD1-201ENST00000302085 NECAP1Q8NC96 275 aa17.38■□□□□ 0.37
SMAD1-201ENST00000302085 SHANK2-AS3Q9BTD1 123 aa17.38■□□□□ 0.37
SMAD1-201ENST00000302085 M0QZK8 103 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms