RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 VSTM2AQ8TAG5 236 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 IGF2BP2-AS1Q96M15 143 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 RNF2Q99496 336 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 PAXXQ9BUH6 204 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 C19orf24Q9BVV8 132 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 ARL2-SNX15V9GYD0 113 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 IGF2RP11717 2491 aa10.37□□□□□ -0.75
HIF3A-204ENST00000300862 PPOXP50336 477 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 GNG5P63218 68 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 SPATA45Q537H7 98 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 GSX1Q9H4S2 264 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-204ENST00000300862 AMMECR1Q9Y4X0 333 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-204ENST00000300862 ARHGAP32A7KAX9 2087 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 IGHV1-69-2A0A0G2JMI3 117 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 TCRBV4S1A1TA0A5B7 111 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 MFAP2P55001 183 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 VMA21Q3ZAQ7 101 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 PRR31Q5SQ13 230 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 BLNKQ8WV28 456 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 MRPL32Q9BYC8 188 aaKnown RBP10.36□□□□□ -0.75
HIF3A-204ENST00000300862 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
HIF3A-204ENST00000300862 C22orf46C9J442 243 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 H3BTX0 84 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 AMTP48728 403 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 CX3CL1P78423 397 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 TNXAQ16473 311 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 MED13LQ71F56 2210 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 GNB1LQ9BYB4 327 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
HIF3A-204ENST00000300862 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 VSTM5A8MXK1 200 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 HYPMO75409 117 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 SUB1P53999 127 aaKnown RBP eCLIP10.35□□□□□ -0.75
HIF3A-204ENST00000300862 FOXC1Q12948 553 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 PRR27Q6MZM9 219 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 LINC00311Q8N616 119 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 OR4A5Q8NH83 315 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 LINC01560Q8TB33 94 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 TMEM133Q9H2Q1 129 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
HIF3A-204ENST00000300862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.34□□□□□ -0.75
HIF3A-204ENST00000300862 A0A1W2PS18 150 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 ISLRO14498 428 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 GOSR1O95249 250 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 IGLC2P0DOY2 106 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 PMCHP20382 165 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 COX7A1P24310 79 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 LEMD1Q68G75 181 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 ZNF329Q86UD4 541 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 IGFBPL1Q8WX77 278 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 TNFRSF19Q9NS68 423 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 INS-IGF2F8WCM5 200 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 FSTL3O95633 263 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 GRNP28799 593 aaKnown RBP10.34□□□□□ -0.75
HIF3A-204ENST00000300862 TBR1Q16650 682 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 ZNF596Q8TC21 504 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 ZNF835Q9Y2P0 537 aa10.34□□□□□ -0.75
HIF3A-204ENST00000300862 J3KRW8 73 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 ZNF253O75346 499 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 NIT1Q86X76 327 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 SVEP1Q4LDE5 3571 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 PEX7O00628 323 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 MC5RP33032 325 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 ZNF137PP52743 207 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 KAAG1Q9UBP8 84 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 CDC42EP3Q9UKI2 254 aa10.33□□□□□ -0.76
HIF3A-204ENST00000300862 BMPR1BO00238 502 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 LY6HO94772 140 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 Q6ZN92 141 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-204ENST00000300862 MT-ND6P03923 174 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-204ENST00000300862 SRIP30626 198 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 APOBEC3AP31941 199 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-204ENST00000300862 RPL27AP46776 148 aaKnown RBP10.32□□□□□ -0.76
HIF3A-204ENST00000300862 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
HIF3A-204ENST00000300862 Q6ZVH6 145 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms