RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 GCGP01275 180 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 HLA-DQA1P01909 254 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 PSG1P11464 419 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 PRSS3P2Q8NHM4 247 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 IGHV3-35A0A0C4DH35 117 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 PPP1R17O96001 155 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 GTSCR1Q86UQ5 136 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 TTC9CQ8N5M4 171 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 A0A0G2JRQ6 117 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 CENPVL3A0A0U1RRI6 287 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 SSTP61278 116 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 LY6G5BQ8NDX9 201 aa6.67□□□□□ -1.34
SNRPD1-201ENST00000300413 C19orf84I3L1E1 186 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 TMEM88Q6PEY1 159 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 Q6ZRM9 215 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 KMT2EQ8IZD2 1858 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 IGLV1-47P01700 117 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 CCL20P78556 96 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 SPRNQ5BIV9 151 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 SLC25A39Q9BZJ4 359 aaPredicted RBP6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 SIRPDQ9H106 197 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 LIME1Q9H400 295 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 S4R3C0 116 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 MALRD1Q5VYJ5 2156 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 AREGP15514 252 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 CAMPP49913 170 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 CENPWQ5EE01 88 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 C5orf24Q7Z6I8 188 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 KLHL30-AS1Q8NEE0 82 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 MGST2Q99735 147 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 PHLDA3Q9Y5J5 127 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 ATRXP46100 2492 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 NDUFA4O00483 81 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 SCGB1D1O95968 90 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 C19orf35Q6ZS72 473 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 MED12LQ86YW9 2145 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 FAM24BQ8N5W8 94 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 EPDR1Q9UM22 224 aa6.66□□□□□ -1.34
SNRPD1-201ENST00000300413 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 TCF24Q7RTU0 167 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 ZNF114Q8NC26 417 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 TBX15Q96SF7 602 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 LINC01619G3V211 115 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 ZNF207O43670 478 aaKnown RBP6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 TMEM50AO95807 157 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 IGKV1-39P01597 117 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 IGKV1D-39P04432 117 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 DEFB112Q30KQ8 113 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 STHQ8IWL8 128 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 WFDC1Q9HC57 220 aa6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.34
SNRPD1-201ENST00000300413 CHD8Q9HCK8 2581 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 TLN1Q9Y490 2541 aaKnown RBP6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 ZNF98A6NK75 572 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 H7C1H1 209 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 CRISP2P16562 243 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 ASIPP42127 132 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 RPL35P42766 123 aaKnown RBP6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 MFAP2P55001 183 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 LMO4P61968 165 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 CYTL1Q9NRR1 136 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 APCSP02743 223 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 AMBPP02760 352 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 GATA2P23769 480 aaPredicted RBP6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 IFITM2Q01629 132 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 C3orf56Q8N813 242 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 FOXC2Q99958 501 aa6.65□□□□□ -1.35
SNRPD1-201ENST00000300413 NCOA6Q14686 2063 aaPredicted RBP6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 FREM1Q5H8C1 2179 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 TRAV21A0A0B4J279 112 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 J3KRW8 73 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 SFRP2Q96HF1 295 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 SDF2L1Q9HCN8 221 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 NPIPB6E9PJ23 425 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 NTF3P20783 257 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 TCL1AP56279 114 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 RPL15P61313 204 aaKnown RBP6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 FOXE3Q13461 319 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 KIAA2026Q5HYC2 2103 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 MAPK1IP1LQ8NDC0 245 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 LINC00527Q9UJ94 153 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 NOTCH3Q9UM47 2321 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 SHANK1Q9Y566 2161 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 TNFRSF13BO14836 293 aaPredicted RBP6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 NSUN5P1Q3KNT7 163 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 DGAT2L7PQ6IED9 249 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 ZNF343Q6P1L6 599 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 IGFBPL1Q8WX77 278 aa6.64□□□□□ -1.35
SNRPD1-201ENST00000300413 GOLT1BQ9Y3E0 138 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms