RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CD81P60033 236 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 RHOGP84095 191 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 Q6YL49 198 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 LINC00305Q7Z4B0 112 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 TOMM40O96008 361 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 FCGR2BP31994 310 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 UBE2G2P60604 165 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 C15orf32Q32M92 178 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 CST9LP1Q5W188 147 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 OR51G1Q8NGK1 321 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 OR4F5Q8NH21 305 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 OR4F4Q96R69 305 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 S4R3C0 116 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 CREBBPQ92793 2442 aa12.3□□□□□ -0.44
HERPUD1-201ENST00000300302 PDE6DO43924 150 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 LYZP61626 148 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 GAR1Q9NY12 217 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 UNC79Q9P2D8 2635 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 AP4M1O00189 453 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 BLCAPP62952 87 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM74A3Q4VXF1 159 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 OR5AU1Q8NGC0 362 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 VPREB3Q9UKI3 123 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
HERPUD1-201ENST00000300302 MORN5Q5VZ52 161 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM90A2PQ658T7 463 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 S100A7AQ86SG5 101 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 Q8WTZ3 238 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM167A-AS1Q96KT0 104 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 ZNF469Q96JG9 3925 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-201ENST00000300302 TRAV5A0A0B4J249 113 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM223BA6NKX1 122 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 F6UZH7 168 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 F8W735 103 aaPredicted RBP12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 H3BUA1 57 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 M0R036 132 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 IGHV3-23P01764 117 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 FAM223AQ8IWN6 122 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 ZNF502Q8TBZ5 544 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 ZNF503Q96F45 646 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 MS4A10Q96PG2 267 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.44
HERPUD1-201ENST00000300302 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 TRBV7-1A0A0A6YYK4 115 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 H3BQ15 152 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 RNF125Q96EQ8 232 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 ZANQ9Y493 2812 aa12.27□□□□□ -0.45
HERPUD1-201ENST00000300302 OR2C1O95371 312 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 BRI3O95415 125 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 IL4P05112 153 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 OR10J4P0C629 311 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 ATP5G3P48201 142 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 YTHDF2Q9Y5A9 579 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-201ENST00000300302 WI2-2373I1.2A0A1W2PRP0 233 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 CD5LO43866 347 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 TRGV3P03979 118 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 CTSGP08311 255 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 KIAA0141Q14154 515 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 AWAT1Q58HT5 328 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 TVP23CQ96ET8 276 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 ATP6V0BQ99437 205 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 HOXA3O43365 443 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 RHEBQ15382 184 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 NOL4LQ96MY1 436 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-201ENST00000300302 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 CLEC3BP05452 202 aa12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 GPR183P32249 361 aa12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 SRP14P37108 136 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 PNRC1Q12796 327 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-201ENST00000300302 PYYP10082 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms