RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 MORN5Q5VZ52 161 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 ZNF788Q6ZQV5 615 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PYYP10082 97 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 SSBP2P81877 361 aaPredicted RBP10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PRR20EP86478 221 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PRR20CP86479 221 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PRR20DP86480 221 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PRR20BP86481 221 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 PRR20AP86496 221 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 NHLH1Q02575 133 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 EBLN2Q6P2I7 272 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 TMEM186Q96B77 213 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 ZNF331Q9NQX6 463 aaPredicted RBP10.91□□□□□ -0.66
CTDP1-202ENST00000299543 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 NPIPB3Q92617 1050 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
CTDP1-202ENST00000299543 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
CTDP1-202ENST00000299543 C22orf46C9J442 243 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
CTDP1-202ENST00000299543 TNXAQ16473 311 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 HCP5Q6MZN7 132 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 SSX8Q7RTT4 187 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 MUC15Q8N387 334 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 TSKUQ8WUA8 353 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 FLYWCH2Q96CP2 140 aaKnown RBP10.9□□□□□ -0.66
CTDP1-202ENST00000299543 SAP30LQ9HAJ7 183 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 ESDP10768 282 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
CTDP1-202ENST00000299543 TAS2R45P59539 299 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 RPL8P62917 257 aaKnown RBP10.9□□□□□ -0.66
CTDP1-202ENST00000299543 RHOGP84095 191 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 SLC25A48Q6ZT89 311 aaKnown RBP10.9□□□□□ -0.66
CTDP1-202ENST00000299543 BLNKQ8WV28 456 aa10.9□□□□□ -0.66
CTDP1-202ENST00000299543 SPTAN1Q13813 2472 aaKnown RBP10.9□□□□□ -0.67
CTDP1-202ENST00000299543 H3BTX0 84 aa10.9□□□□□ -0.67
CTDP1-202ENST00000299543 ORM2P19652 201 aa10.9□□□□□ -0.67
CTDP1-202ENST00000299543 CD24P25063 80 aa10.9□□□□□ -0.67
CTDP1-202ENST00000299543 TMEM249Q2WGJ8 235 aa10.9□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.9□□□□□ -0.67
CTDP1-202ENST00000299543 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.67
CTDP1-202ENST00000299543 MRPS16Q9Y3D3 137 aaKnown RBP10.9□□□□□ -0.67
CTDP1-202ENST00000299543 COL6A6A6NMZ7 2263 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 SLC25A17O43808 307 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 COX7A2P2O60397 106 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 TNFRSF1AP19438 455 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 BMI1P35226 326 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF714Q96N38 554 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 RELNP78509 3460 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 APCSP02743 223 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
CTDP1-202ENST00000299543 PLP1P60201 277 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 OR8B3Q8NGG8 313 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF503Q96F45 646 aa10.89□□□□□ -0.67
CTDP1-202ENST00000299543 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 BSPH1Q075Z2 132 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
CTDP1-202ENST00000299543 GTF2H5Q6ZYL4 71 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 TNFRSF14Q92956 283 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 H3BUT2 72 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 AREGP15514 252 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 LGALS4P56470 323 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 C16orf97H3BN30 126 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 MFAP2P55001 183 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 CD69Q07108 199 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 SLC25A34Q6PIV7 304 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 FER1L6-AS1Q8NA97 138 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 DYNLRB1Q9NP97 96 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 V9GYV3 84 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
CTDP1-202ENST00000299543 LRBAP50851 2863 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 C7orf71A4D174 169 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 NDUFS8O00217 210 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 BMPR1BO00238 502 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 MOSP00540 346 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 CSN3P07498 182 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 GATA4P43694 442 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 LGALS7P47929 136 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 UBE2G1P62253 170 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 TM4SF20Q53R12 229 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 BVES-AS1Q5T3Y7 98 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF355PQ9NSJ1 428 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 PPIAL4EA0A075B759 164 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 PRRG2O14669 202 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 PPIAL4FP0DN26 164 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 LRRC10Q5BKY1 277 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 FAM222BQ8WU58 562 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms