RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FANCD2OSQ96PS1 177 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 GAR1Q9NY12 217 aaKnown RBP16.24■□□□□ 0.19
SMCO4-201ENST00000298966 DMRT1Q9Y5R6 373 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 HUWE1Q7Z6Z7 4374 aaKnown RBP16.23■□□□□ 0.19
SMCO4-201ENST00000298966 TRAV30A0A087WSZ9 112 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 MFSD2BA6NFX1 497 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 AGPAT2O15120 278 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 FABP1P07148 127 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 S100A1P23297 94 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 FCGR2BP31994 310 aaPredicted RBP16.23■□□□□ 0.19
SMCO4-201ENST00000298966 NECAP1Q8NC96 275 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 MGST2Q99735 147 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 TXN2Q99757 166 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 GGTLC1Q9BX51 225 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 DNAH1Q9P2D7 4330 aa16.23■□□□□ 0.19
SMCO4-201ENST00000298966 TRBV9A0A0B4J1U6 114 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 RAB19A4D1S5 217 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 FAM223BA6NKX1 122 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 K7EIM0 57 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 NPBWR1P48145 328 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 RND2P52198 227 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 ACOT6Q3I5F7 207 aaPredicted RBP16.22■□□□□ 0.19
SMCO4-201ENST00000298966 ZNF329Q86UD4 541 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 FAM223AQ8IWN6 122 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 COMMD1Q8N668 190 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 OR5T1Q8NG75 326 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 MARC2Q969Z3 335 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 ACY3Q96HD9 319 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 PRR25Q96S07 402 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 TRGV9Q99603 122 aa16.22■□□□□ 0.19
SMCO4-201ENST00000298966 MFAP4P55083 255 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 ZNF616Q08AN1 781 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 ACSM6Q6P461 480 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 KLHL30-AS1Q8NEE0 82 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 NPIPB3Q92617 1050 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 RPRMQ9NS64 109 aa16.21■□□□□ 0.19
SMCO4-201ENST00000298966 LINC01548A6NM66 108 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 TEX46H3BTG2 121 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 CLN5O75503 358 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 PPIFP30405 207 aaKnown RBP16.2■□□□□ 0.18
SMCO4-201ENST00000298966 FHITP49789 147 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 FAM209BQ5JX69 171 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 FFAR4Q5NUL3 377 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 C18orf65Q6ZTR6 163 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 HRH4Q9H3N8 390 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 SLC45A2Q9UMX9 530 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 PXMP4Q9Y6I8 212 aa16.2■□□□□ 0.18
SMCO4-201ENST00000298966 TRAV1-1A0A0B4J248 108 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 LCE6AA0A183 80 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 ZFP92A6NM28 416 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 G3V318 75 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 HBE1P02100 147 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 H2AFB1P0C5Y9 115 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 M6PRP20645 277 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 OR10J1P30954 320 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 ELLP55199 621 aaPredicted RBP16.19■□□□□ 0.18
SMCO4-201ENST00000298966 RAB2AP61019 212 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 B2MP61769 119 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 PRR20EP86478 221 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 PRR20CP86479 221 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 PRR20DP86480 221 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 PRR20BP86481 221 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 PRR20AP86496 221 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 MLANAQ16655 118 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 CYP2G1PQ6ZSU1 146 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 MBD3L1Q8WWY6 194 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 CITED4Q96RK1 184 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 C21orf62Q9NYP8 219 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 FBXL7Q9UJT9 491 aa16.19■□□□□ 0.18
SMCO4-201ENST00000298966 IGKV1OR2-108A0A075B7D4 117 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 C9orf66Q5T8R8 295 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 UQCC3Q6UW78 93 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 C19orf35Q6ZS72 473 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 USMG5Q96IX5 58 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 ZNF355PQ9NSJ1 428 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 SLC39A9Q9NUM3 307 aa16.18■□□□□ 0.18
SMCO4-201ENST00000298966 TRBV7-1A0A0A6YYK4 115 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 OR2J3O76001 311 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 SLC35B1P78383 322 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 RHOGP84095 191 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 CFHR3Q02985 330 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 STPG3Q8N7X2 389 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 EEF1AKMT3Q96AZ1 226 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 DUX3Q96PT4 197 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 RNF2Q99496 336 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 VSIRQ9H7M9 311 aa16.17■□□□□ 0.18
SMCO4-201ENST00000298966 SEC14L6B5MCN3 397 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 IGLV1-40P01703 118 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 SPSB3Q6PJ21 355 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 RPP25LQ8N5L8 163 aaKnown RBP16.16■□□□□ 0.18
SMCO4-201ENST00000298966 OR10G4Q8NGN3 311 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 OR10G9Q8NGN4 311 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 OR10G7Q8NGN6 311 aa16.16■□□□□ 0.18
SMCO4-201ENST00000298966 ACTR3CQ9C0K3 210 aaPredicted RBP16.16■□□□□ 0.18
SMCO4-201ENST00000298966 IGKV1D-37A0A075B6S9 117 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 A0A0G2JLM5 398 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 CTXND1A0A1B0GTU2 59 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 CCL24O00175 119 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 GNG7O60262 68 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 YIF1AO95070 293 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms