RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
SPIDR-201ENST00000297423 A8MWL6 223 aa12.14□□□□□ -0.47
SPIDR-201ENST00000297423 GUSBP1Q15486 140 aa12.14□□□□□ -0.47
SPIDR-201ENST00000297423 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
SPIDR-201ENST00000297423 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
SPIDR-201ENST00000297423 MMP23AO75900 390 aa12.14□□□□□ -0.47
SPIDR-201ENST00000297423 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
SPIDR-201ENST00000297423 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-201ENST00000297423 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 ADTRPQ96IZ2 230 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 AP5S1Q9NUS5 200 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 H0YJW9 148 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 DSCAML1Q8TD84 2053 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 CD5LO43866 347 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 LIPFP07098 398 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 ADH4P08319 380 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 PAX2Q02962 417 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-201ENST00000297423 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
SPIDR-201ENST00000297423 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
SPIDR-201ENST00000297423 DSPP15924 2871 aaKnown RBP12.13□□□□□ -0.47
SPIDR-201ENST00000297423 C2orf70A6NJV1 201 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 CSN1S1P47710 185 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 C10orf55Q5SWW7 151 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 Q8N7P7 452 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 NPIPB11E5RHQ5 1161 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 PPBPP02775 128 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 FABP2P12104 132 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-201ENST00000297423 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-201ENST00000297423 KIR3DS1Q14943 382 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 MORN2Q502X0 79 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 CACNA1AO00555 2505 aa12.12□□□□□ -0.47
SPIDR-201ENST00000297423 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 Q8TCH9 128 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 ZNF146Q15072 292 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 UTF1Q5T230 341 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
SPIDR-201ENST00000297423 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 ZNF134P52741 427 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 CACNG7P62955 275 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 IGF2-ASQ6U949 168 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 CXXC4Q9H2H0 198 aa12.11□□□□□ -0.47
SPIDR-201ENST00000297423 A1L4Q6 167 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 LYZP61626 148 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 CIARTQ8N365 385 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-201ENST00000297423 C11orf52Q96A22 123 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 SLC25A33Q9BSK2 321 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 PRB3Q04118 309 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-201ENST00000297423 ZNF788Q6ZQV5 615 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 MYO18BQ8IUG5 2567 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 GOLT1AQ6ZVE7 132 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 CALYQ9NYX4 217 aa12.1□□□□□ -0.47
SPIDR-201ENST00000297423 PRSS1P07477 247 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-201ENST00000297423 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-201ENST00000297423 FAM71F2Q6NXP2 309 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
SPIDR-201ENST00000297423 RNFT1Q5M7Z0 435 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 PPIAL4GP0DN37 164 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 WDR82Q6UXN9 313 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
SPIDR-201ENST00000297423 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-201ENST00000297423 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 PROP1O75360 226 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 TIMM23BQ5SRD1 257 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 LCNL1Q6ZST4 164 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 CD177Q8N6Q3 437 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 IGKV3D-15A0A087WSY6 115 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 PRNDQ9UKY0 176 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 TM4SF5O14894 197 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 CHODLQ9H9P2 273 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 SPRR3Q9UBC9 169 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 CEP295Q9C0D2 2601 aa12.08□□□□□ -0.48
SPIDR-201ENST00000297423 FOXE3Q13461 319 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 LINC00470Q9BZP3 86 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 IDI2-AS1Q9NZ38 188 aa12.07□□□□□ -0.48
SPIDR-201ENST00000297423 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
SPIDR-201ENST00000297423 RBP4P02753 201 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms