RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 IQCF6A8MYZ5 107 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
HPS3-201ENST00000296051 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 COLCA1Q6ZS62 124 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 ZNF114Q8NC26 417 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 LINC00479Q96M42 142 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 PRB1P04280 392 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 PLA2G5P39877 138 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 SELENOTP62341 195 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 FOXL1Q12952 345 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 PEX7O00628 323 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 STAG3L2P0CL84 134 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 STAG3L3P0CL85 134 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 NTF4P34130 210 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 MLANAQ16655 118 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 OR10W1Q8NGF6 305 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 MED13Q9UHV7 2174 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
HPS3-201ENST00000296051 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 DENND4AQ7Z401 1863 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 KBTBD11-OT1A0A1B0GTJ5 212 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 IGHV1-46P01743 117 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 MBNL2Q5VZF2 373 aaKnown RBP11.08□□□□□ -0.64
HPS3-201ENST00000296051 RPRMLQ8N4K4 120 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 KLK15Q9H2R5 256 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 IFI27L2Q9H2X8 130 aa11.08□□□□□ -0.64
HPS3-201ENST00000296051 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 ZNF146Q15072 292 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 ARL6IP6Q8N6S5 226 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 EEF1AKMT3Q96AZ1 226 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 PRSS22Q9GZN4 317 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 OR2T8A6NH00 312 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 APOHP02749 345 aaPredicted RBP11.07□□□□□ -0.64
HPS3-201ENST00000296051 SORL1Q92673 2214 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 NSUN5P1Q3KNT7 163 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 Q6ZVH6 145 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 FNDC4Q9H6D8 234 aaPredicted RBP11.07□□□□□ -0.64
HPS3-201ENST00000296051 LRRK2Q5S007 2527 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
HPS3-201ENST00000296051 RIPPLY3P57055 190 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
HPS3-201ENST00000296051 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 BRD3OSQ6XYD6 125 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 LYPD6BQ8NI32 183 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 MGST2Q99735 147 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 CIDEAO60543 219 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 IL4P05112 153 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 FABP2P12104 132 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 ZNF138P52744 262 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 C7orf71A4D174 169 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 TMEM189A5PLL7 270 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 B4DSR2 109 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
HPS3-201ENST00000296051 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 MORN2Q502X0 79 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 MPV17L2Q567V2 206 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 WDR82Q6UXN9 313 aa11.06□□□□□ -0.64
HPS3-201ENST00000296051 SAA2-SAA4A0A096LPE2 208 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 hDV102S1A0JD36 115 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 H3BUT2 72 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 SAA2P0DJI9 122 aaPredicted RBP11.05□□□□□ -0.64
HPS3-201ENST00000296051 GPR183P32249 361 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 MEF2CQ06413 473 aaPredicted RBP11.05□□□□□ -0.64
HPS3-201ENST00000296051 LYPD6Q86Y78 171 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 CDC42EP3Q9UKI2 254 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 LINC00312Q9Y6C7 94 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 PLXNB1O43157 2135 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 CRXO43186 299 aaPredicted RBP11.05□□□□□ -0.64
HPS3-201ENST00000296051 HTN3P15516 51 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 ZNF474Q6S9Z5 364 aaPredicted RBP11.05□□□□□ -0.64
HPS3-201ENST00000296051 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 H3BVH4 76 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 TM4SF5O14894 197 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 GPX1P07203 203 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 Q6ZWC4 215 aa11.05□□□□□ -0.64
HPS3-201ENST00000296051 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
HPS3-201ENST00000296051 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 DSCR9P59020 149 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 SLC25A33Q9BSK2 321 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms