RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 MEF2DQ14814 521 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 LGALS9BQ3B8N2 356 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 KCTD21Q4G0X4 260 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 OR1S2Q8NGQ3 325 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 OR13C8Q8NGS7 320 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 Q8WTZ3 238 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 NPIPB3Q92617 1050 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 GPR146Q96CH1 333 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 ZNF486Q96H40 463 aaPredicted RBP6.61□□□□□ -1.35
CNOT9-202ENST00000295701 NARS2Q96I59 477 aaKnown RBP6.61□□□□□ -1.35
CNOT9-202ENST00000295701 COPZ2Q9P299 210 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 DNAH5Q8TE73 4624 aa6.61□□□□□ -1.35
CNOT9-202ENST00000295701 TRAV30A0A087WSZ9 112 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 FAM25AB3EWG3 89 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 FAM25CB3EWG5 89 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 FAM25GB3EWG6 89 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 BUB3O43684 328 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 IL4P05112 153 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 OR5AC1P0C628 307 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 HTR2BP41595 481 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 SPCS3P61009 180 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 SCGB2B2Q4G0G5 96 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 RNASE10Q5GAN6 216 aaKnown RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 FAAP20Q6NZ36 180 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 Q6ZR54 194 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 OR51G1Q8NGK1 321 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 RNASE11Q8TAA1 199 aaKnown RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 MARCH1Q8TCQ1 289 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 GLYATL2Q8WU03 294 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 RRNAD1Q96FB5 475 aaKnown RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 ACY3Q96HD9 319 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 HEYLQ9NQ87 328 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-202ENST00000295701 CACNG5Q9UF02 275 aa6.6□□□□□ -1.35
CNOT9-202ENST00000295701 RPS10-NUDT3A0A1W2PQS6 291 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 ZNF705FA8MVS1 300 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 ATG12O94817 140 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 IFNA10P01566 189 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 CD74P04233 296 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 ZNF705DP0CH99 300 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 ZNF705BP0CI00 300 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 SPART-AS1P0CW21 52 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 PSG1P11464 419 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 HLA-DRB4P13762 266 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 HTN3P15516 51 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 AP2S1P53680 142 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 SNRPD3P62318 126 aaKnown RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 SIGLEC15Q6ZMC9 328 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 TERB2Q8NHR7 220 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 LINC00052Q96N35 136 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 ABHD1Q96SE0 405 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 NEU1Q99519 415 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 FUNDC2Q9BWH2 189 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 C1QTNF4Q9BXJ3 329 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 NRN1Q9NPD7 142 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.59□□□□□ -1.35
CNOT9-202ENST00000295701 DKK2Q9UBU2 259 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 MTFP1Q9UDX5 166 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 HLA-DRB4X5D2U9 266 aa6.59□□□□□ -1.35
CNOT9-202ENST00000295701 TEX13DA0A0J9YY54 714 aaPredicted RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 CEBPZOSA8MTT3 80 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 F6UB75 175 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 CDS2O95674 445 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 RAB3DO95716 219 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 TOMM40O96008 361 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 IFNA21P01568 189 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 PRM2P04554 102 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 RD3LP0DJH9 198 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 NKX2-1P43699 371 aaPredicted RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 EIF2B2P49770 351 aaKnown RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 NUTF2P61970 127 aaKnown RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 AARDQ4LEZ3 155 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 FAM222AQ5U5X8 452 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 ZNF709Q8N972 641 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 CCDC71LQ8N9Z2 235 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 SLC24A4Q8NFF2 622 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 ZFAND1Q8TCF1 268 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 RNASEH2CQ8TDP1 164 aaKnown RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 NIPSNAP3BQ9BS92 247 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 NAA50Q9GZZ1 169 aaKnown RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
CNOT9-202ENST00000295701 SEPSECSQ9HD40 501 aaKnown RBP6.58□□□□□ -1.36
CNOT9-202ENST00000295701 A0A087WXM4 84 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 SCGB2A1O75556 95 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 SLC25A4P12235 298 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 ZNF90Q03938 601 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 TMEM268Q5VZI3 342 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 C1orf158Q8N1D5 194 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 ARRDC1Q8N5I2 433 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 TMEM229BQ8NBD8 167 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
CNOT9-202ENST00000295701 PBDC1Q9BVG4 233 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms