RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 OR9G4Q8NGQ1 327 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 SMKR1H3BMG3 65 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 SIGLEC15Q6ZMC9 328 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 ATP5L2Q7Z4Y8 100 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 TMEM30BQ3MIR4 351 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 TMEM219Q86XT9 240 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 GNB1LQ9BYB4 327 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 LAGE3Q14657 143 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 Q6AWC8 147 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 IFI27L1Q96BM0 104 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 PINLYPA6NC86 204 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 RS1O15537 224 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 SUMO4Q6EEV6 95 aa13.36□□□□□ -0.27
SSRP1-202ENST00000293880 SNRNP200O75643 2136 aaKnown RBP13.36□□□□□ -0.27
SSRP1-202ENST00000293880 ASXL3Q9C0F0 2248 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 IGKV1-9A0A0C4DH69 117 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 GGTLC1Q9BX51 225 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF138P52744 262 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 NPSP0C0P6 89 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 DLX4Q92988 240 aaPredicted RBP13.35□□□□□ -0.27
SSRP1-202ENST00000293880 ABHD17AQ96GS6 310 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 PYY3Q5JQD4 70 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF664Q8N3J9 261 aa13.35□□□□□ -0.27
SSRP1-202ENST00000293880 C5orf47Q569G3 176 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 PAX4O43316 350 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 KLF12Q9Y4X4 402 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 TIMM23O14925 209 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 TEX38Q6PEX7 206 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 TMEM144Q7Z5S9 345 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 CHCHD1Q96BP2 118 aaKnown RBP13.34□□□□□ -0.27
SSRP1-202ENST00000293880 VGLL1Q99990 258 aa13.34□□□□□ -0.27
SSRP1-202ENST00000293880 CHD5Q8TDI0 1954 aa13.33□□□□□ -0.27
SSRP1-202ENST00000293880 CSRP3P50461 194 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 SPRR3Q9UBC9 169 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 UNC13CQ8NB66 2214 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 C17orf100A8MU93 164 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 F8VVB4 439 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 F8VWA3 439 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 INS-IGF2F8WCM5 200 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 CDK2AP2O75956 126 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 INSP01308 110 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 ACTL10Q5JWF8 245 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 WBP1Q96G27 269 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 CABIN1Q9Y6J0 2220 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 LYZL1Q6UWQ5 148 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 Q8TAT8 98 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 NEUROG3Q9Y4Z2 214 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
SSRP1-202ENST00000293880 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
SSRP1-202ENST00000293880 ANXA2RQ3ZCQ2 193 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 TSKUQ8WUA8 353 aa13.33□□□□□ -0.28
SSRP1-202ENST00000293880 IGHV1-18A0A0C4DH31 117 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 JPT2Q9H910 190 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 COLCA2A8K830 154 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 CACNG8Q8WXS5 425 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 LINC00205P59089 165 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 FAM57AQ8TBR7 257 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 A0A1W2PR77 199 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 CSRP2Q16527 193 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 PAQR4Q8N4S7 273 aaPredicted RBP13.32□□□□□ -0.28
SSRP1-202ENST00000293880 OSTCQ9NRP0 149 aa13.32□□□□□ -0.28
SSRP1-202ENST00000293880 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 TMEM133Q9H2Q1 129 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 SELLP14151 372 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 TMEM105Q8N8V8 129 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 TRAV40A0A0B4J280 105 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 SH2D1AO60880 128 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
SSRP1-202ENST00000293880 PVRIGQ6DKI7 326 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 C1orf162Q8NEQ5 155 aaPredicted RBP13.31□□□□□ -0.28
SSRP1-202ENST00000293880 TRAV13-1A0A0B4J241 112 aa13.31□□□□□ -0.28
SSRP1-202ENST00000293880 PATJQ8NI35 1801 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 YPEL1O60688 119 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 NEU4Q8WWR8 484 aaPredicted RBP13.3□□□□□ -0.28
SSRP1-202ENST00000293880 YPEL2Q96QA6 119 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 RCHY1Q96PM5 261 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
SSRP1-202ENST00000293880 PAX8Q06710 450 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 SLC50A1Q9BRV3 221 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 TDRD6O60522 2096 aaKnown RBP13.29□□□□□ -0.28
SSRP1-202ENST00000293880 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms