RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SCGB3A2Q96PL1 93 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 RAB40CQ96S21 281 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 CACFD1Q9UGQ2 172 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 U3KQ87 197 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 IGKV1D-37A0A075B6S9 117 aa18.27■□□□□ 0.52
U2AF1-201ENST00000291552 IFNA4P05014 189 aa18.27■□□□□ 0.52
U2AF1-201ENST00000291552 EIF2B2P49770 351 aaKnown RBP18.27■□□□□ 0.52
U2AF1-201ENST00000291552 MCFD2Q8NI22 146 aa18.27■□□□□ 0.52
U2AF1-201ENST00000291552 PRR20EP86478 221 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 PRR20CP86479 221 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 PRR20DP86480 221 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 PRR20BP86481 221 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 PRR20AP86496 221 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 SIGLEC15Q6ZMC9 328 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 HRH4Q9H3N8 390 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 NRN1Q9NPD7 142 aa18.26■□□□□ 0.51
U2AF1-201ENST00000291552 ELOA3CA0A087WX78 387 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-201ENST00000291552 PITX3O75364 302 aa18.25■□□□□ 0.51
U2AF1-201ENST00000291552 MIFP14174 115 aa18.25■□□□□ 0.51
U2AF1-201ENST00000291552 AP2S1P53680 142 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-201ENST00000291552 C2CD4CQ8TF44 421 aa18.25■□□□□ 0.51
U2AF1-201ENST00000291552 RNF125Q96EQ8 232 aa18.25■□□□□ 0.51
U2AF1-201ENST00000291552 V9GYH0 126 aa18.25■□□□□ 0.51
U2AF1-201ENST00000291552 SRPXP78539 464 aa18.24■□□□□ 0.51
U2AF1-201ENST00000291552 GAMTQ14353 236 aa18.24■□□□□ 0.51
U2AF1-201ENST00000291552 OR1S1Q8NH92 325 aa18.24■□□□□ 0.51
U2AF1-201ENST00000291552 NOL3O60936 208 aaKnown RBP18.23■□□□□ 0.51
U2AF1-201ENST00000291552 ANXA3P12429 323 aa18.23■□□□□ 0.51
U2AF1-201ENST00000291552 ZNF90Q03938 601 aa18.23■□□□□ 0.51
U2AF1-201ENST00000291552 SEPSECSQ9HD40 501 aaKnown RBP18.23■□□□□ 0.51
U2AF1-201ENST00000291552 TBC1D24Q9ULP9 559 aa18.23■□□□□ 0.51
U2AF1-201ENST00000291552 APLNQ9ULZ1 77 aa18.23■□□□□ 0.51
U2AF1-201ENST00000291552 H3BMM0 161 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 HLA-DMBP28068 263 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 DEFB1P60022 68 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 ZNF79Q15937 498 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 TMED4Q7Z7H5 227 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 CELA1Q9UNI1 258 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 BOLA1Q9Y3E2 137 aa18.22■□□□□ 0.51
U2AF1-201ENST00000291552 GPX4P36969 197 aaPredicted RBP18.21■□□□□ 0.51
U2AF1-201ENST00000291552 SNRPD3P62318 126 aaKnown RBP18.21■□□□□ 0.51
U2AF1-201ENST00000291552 Q6ZTC4 211 aa18.21■□□□□ 0.51
U2AF1-201ENST00000291552 PBDC1Q9BVG4 233 aa18.21■□□□□ 0.51
U2AF1-201ENST00000291552 HERC2O95714 4834 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 DUXBA0A1W2PPF3 345 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 ZFP92A6NM28 416 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 IAPPP10997 89 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 ATP5IP56385 69 aaPredicted RBP18.2■□□□□ 0.5
U2AF1-201ENST00000291552 PYDC2Q56P42 97 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 OR8G2PQ6IF36 304 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 LRTM2Q8N967 370 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 SLC35E1Q96K37 410 aa18.2■□□□□ 0.5
U2AF1-201ENST00000291552 WDR12Q9GZL7 423 aaKnown RBP18.2■□□□□ 0.5
U2AF1-201ENST00000291552 IGLL5B9A064 214 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 C11orf94C9JXX5 98 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 HLA-DRB4P13762 266 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 FAUP35544 74 aaKnown RBP18.19■□□□□ 0.5
U2AF1-201ENST00000291552 TMEM128Q5BJH2 165 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 GDF5OSQ5U4N7 250 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 TOMM5Q8N4H5 51 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 XCL2Q9UBD3 114 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 HLA-DRB4X5D2U9 266 aa18.19■□□□□ 0.5
U2AF1-201ENST00000291552 IGKV1OR2-108A0A075B7D4 117 aa18.18■□□□□ 0.5
U2AF1-201ENST00000291552 TCTAP57738 103 aa18.18■□□□□ 0.5
U2AF1-201ENST00000291552 DNAH17Q9UFH2 4485 aa18.17■□□□□ 0.5
U2AF1-201ENST00000291552 SOCS3O14543 225 aa18.17■□□□□ 0.5
U2AF1-201ENST00000291552 NUP62P37198 522 aaPredicted RBP18.17■□□□□ 0.5
U2AF1-201ENST00000291552 NKX2-1P43699 371 aaPredicted RBP18.17■□□□□ 0.5
U2AF1-201ENST00000291552 LYZP61626 148 aa18.17■□□□□ 0.5
U2AF1-201ENST00000291552 OR2F1Q13607 317 aa18.17■□□□□ 0.5
U2AF1-201ENST00000291552 PRSS46E5RG02 174 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 VAMP1P23763 118 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 AP3S2P59780 193 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 PPP1R1AQ13522 171 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 CCDC190Q86UF4 302 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 THAP8Q8NA92 274 aa18.16■□□□□ 0.5
U2AF1-201ENST00000291552 FAT2Q9NYQ8 4349 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 TRAV10A0A0B4J240 114 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 SFT2D2O95562 160 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 SLC25A6P12236 298 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 ZNF767PQ75MW2 155 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 TRGV9Q99603 122 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 DNAH2Q9P225 4427 aa18.15■□□□□ 0.5
U2AF1-201ENST00000291552 C12orf74Q32Q52 190 aa18.14■□□□□ 0.49
U2AF1-201ENST00000291552 C1QTNF4Q9BXJ3 329 aa18.14■□□□□ 0.49
U2AF1-201ENST00000291552 MAGT1Q9H0U3 335 aa18.14■□□□□ 0.49
U2AF1-201ENST00000291552 NUTF2P61970 127 aaKnown RBP18.13■□□□□ 0.49
U2AF1-201ENST00000291552 C1orf194Q5T5A4 169 aa18.13■□□□□ 0.49
U2AF1-201ENST00000291552 ZNF705AQ6ZN79 300 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-201ENST00000291552 SLC25A21Q9BQT8 299 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-201ENST00000291552 RBM38Q9H0Z9 239 aaKnown RBP18.13■□□□□ 0.49
U2AF1-201ENST00000291552 SAV1Q9H4B6 383 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-201ENST00000291552 IGHV4-4A0A075B6R2 117 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 PIGBOS1A0A0B4J2F0 54 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 PSMB3P49720 205 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 RAB11AP62491 216 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 C17orf77Q96MU5 243 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 LINC00052Q96N35 136 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 SCRT1Q9BWW7 348 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms