RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 F6UZH7 168 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
HIF3A-203ENST00000291300 BPIFB3P59826 476 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 LYZP61626 148 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
HIF3A-203ENST00000291300 ELOBQ15370 118 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 ECSCRQ19T08 205 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 FXYD5Q96DB9 178 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 ZNF469Q96JG9 3925 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-203ENST00000291300 TGIF2-C20orf24A0A0A6YYL0 155 aa13.11□□□□□ -0.31
HIF3A-203ENST00000291300 HNF1AP20823 631 aa13.11□□□□□ -0.31
HIF3A-203ENST00000291300 PAXXQ9BUH6 204 aa13.11□□□□□ -0.31
HIF3A-203ENST00000291300 CR1P17927 2039 aa13.11□□□□□ -0.31
HIF3A-203ENST00000291300 B4DEV8 164 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 HYPMO75409 117 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 SLC25A16P16260 332 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 CRYBB3P26998 211 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 LY6EQ16553 131 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 C16orf82Q7Z2V1 217 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 RNF2Q99496 336 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 H3BTX0 84 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 RAB5AP20339 215 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 PLP1P60201 277 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 SUMO1P63165 101 aaKnown RBP13.1□□□□□ -0.31
HIF3A-203ENST00000291300 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 LINC01551Q86U37 167 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 SGMS2Q8NHU3 365 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
HIF3A-203ENST00000291300 ELOA3CA0A087WX78 387 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-203ENST00000291300 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 C11orf52Q96A22 123 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 ELOVL1Q9BW60 279 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 OR1L6Q8NGR2 347 aa13.09□□□□□ -0.31
HIF3A-203ENST00000291300 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
HIF3A-203ENST00000291300 H3BUX3 64 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 RPL35P42766 123 aaKnown RBP13.07□□□□□ -0.32
HIF3A-203ENST00000291300 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 MLXQ9UH92 298 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 FBXL7Q9UJT9 491 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 K7EN84 100 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 FOLR2P14207 255 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 PLA2G2AP14555 144 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 GP9P14770 177 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-203ENST00000291300 C21orf62Q9NYP8 219 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
HIF3A-203ENST00000291300 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 MOB4Q9Y3A3 225 aa13.07□□□□□ -0.32
HIF3A-203ENST00000291300 TRAV20A0A0B4J274 112 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 CLDN34H7C241 214 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 GNG7O60262 68 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 MFAP4P55083 255 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 Q56UQ5 140 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 Q6ZS46 218 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-203ENST00000291300 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 TOMM40O96008 361 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 TGFAP01135 160 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
HIF3A-203ENST00000291300 USF2Q15853 346 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF329Q86UD4 541 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 CHRDL1Q9BU40 450 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 TMEM242Q9NWH2 141 aa13.06□□□□□ -0.32
HIF3A-203ENST00000291300 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
HIF3A-203ENST00000291300 CXorf65A6NEN9 183 aa13.05□□□□□ -0.32
HIF3A-203ENST00000291300 IL4P05112 153 aa13.05□□□□□ -0.32
HIF3A-203ENST00000291300 Q5PR19 223 aa13.05□□□□□ -0.32
HIF3A-203ENST00000291300 KRTAP1-3Q8IUG1 177 aa13.05□□□□□ -0.32
HIF3A-203ENST00000291300 HELZ2Q9BYK8 2649 aaKnown RBP13.04□□□□□ -0.32
HIF3A-203ENST00000291300 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 PRB4P10163 310 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-203ENST00000291300 ADMP35318 185 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 MYCNOSP40205 109 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 GNG5P63218 68 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 WI2-2373I1.2A0A1W2PRP0 233 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 A6NDX4 124 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 CTSGP08311 255 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 RHOGP84095 191 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms