RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SSX8Q7RTT4 187 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 TMUB1Q9BVT8 246 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 CGB1A6NKQ9 187 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 TBR1Q16650 682 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 RITA1Q96K30 269 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 OR8B2Q96RD0 313 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 SCNM1Q9BWG6 230 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 IGKV3-7A0A075B6H7 116 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 FAM90A9PA6NNJ1 464 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 SRSF12Q8WXF0 261 aaKnown RBP12.88□□□□□ -0.35
SMAD6-201ENST00000288840 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-201ENST00000288840 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-201ENST00000288840 PCSK5Q92824 1860 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
SMAD6-201ENST00000288840 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 BET1LQ9NYM9 111 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-201ENST00000288840 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 MT-ND6P03923 174 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 IL4P05112 153 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 PRSS3P2Q8NHM4 247 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 NUDT11Q96G61 164 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 CLEC5AQ9NY25 188 aa12.88□□□□□ -0.35
SMAD6-201ENST00000288840 CSN1S1P47710 185 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
SMAD6-201ENST00000288840 ZNF138P52744 262 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 Q6ZWC4 215 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 CLEC7AQ9BXN2 247 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 CDC42EP3Q9UKI2 254 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
SMAD6-201ENST00000288840 IGLV3-9A0A075B6K5 115 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 C20orf202A1L168 122 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 ASCL5Q7RTU5 278 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 CHRDL1Q9BU40 450 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 ZNF257Q9Y2Q1 563 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 GOLT1BQ9Y3E0 138 aa12.87□□□□□ -0.35
SMAD6-201ENST00000288840 SNAI2O43623 268 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 RELQ04864 619 aaPredicted RBP12.86□□□□□ -0.35
SMAD6-201ENST00000288840 ECSCRQ19T08 205 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 TMEM133Q9H2Q1 129 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 IGHV3-66A0A0C4DH42 116 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 A8MWL6 223 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 MEF2CQ06413 473 aaPredicted RBP12.86□□□□□ -0.35
SMAD6-201ENST00000288840 KLRD1Q13241 179 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 PIP4P1Q86T03 277 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 DIRC2Q96SL1 478 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 Q9H3A6 140 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
SMAD6-201ENST00000288840 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 RCHY1Q96PM5 261 aa12.86□□□□□ -0.35
SMAD6-201ENST00000288840 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
SMAD6-201ENST00000288840 SH2D7A6NKC9 451 aaPredicted RBP12.85□□□□□ -0.35
SMAD6-201ENST00000288840 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PRR20EP86478 221 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PRR20CP86479 221 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PRR20DP86480 221 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PRR20BP86481 221 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PRR20AP86496 221 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
SMAD6-201ENST00000288840 PPP1R27Q86WC6 154 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 CIARTQ8N365 385 aaPredicted RBP12.85□□□□□ -0.35
SMAD6-201ENST00000288840 AAMDCQ9H7C9 122 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 IGHV3OR16-10A0A075B7F0 116 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 E7EQL1 145 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 LHBP01229 141 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 DDB2Q92466 427 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 V9GYV3 84 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
SMAD6-201ENST00000288840 LGALS7P47929 136 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 VAMP3Q15836 100 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 MRPL36Q9P0J6 103 aaKnown RBP12.85□□□□□ -0.35
SMAD6-201ENST00000288840 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
SMAD6-201ENST00000288840 CFHR2P36980 270 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 RPL15P61313 204 aaKnown RBP12.84□□□□□ -0.35
SMAD6-201ENST00000288840 FA2HQ7L5A8 372 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 SNHG12Q9BXW3 62 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 ATMQ13315 3056 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 PTPN13Q12923 2485 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 PSG1P11464 419 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 TIMM23O14925 209 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 TCF21O43680 179 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 HIF1ANQ9NWT6 349 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
SMAD6-201ENST00000288840 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
SMAD6-201ENST00000288840 OR8A1Q8NGG7 326 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms