RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TRAV6A0A075B6T7 132 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 LY86O95711 162 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 POLR2GP62487 172 aaKnown RBP eCLIP6.8□□□□□ -1.32
HMGN1-201ENST00000288344 HAGHQ16775 308 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 C4orf46Q504U0 113 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 TMEM182Q6ZP80 229 aaPredicted RBP6.8□□□□□ -1.32
HMGN1-201ENST00000288344 DEFB125Q8N687 156 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 ZBTB8BQ8NAP8 495 aaPredicted RBP6.8□□□□□ -1.32
HMGN1-201ENST00000288344 OR1S2Q8NGQ3 325 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 COQ8AQ8NI60 647 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 ST8SIA2Q92186 375 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 ASCL2Q99929 193 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
HMGN1-201ENST00000288344 RCL1Q9Y2P8 373 aaKnown RBP6.8□□□□□ -1.32
HMGN1-201ENST00000288344 FAM240BA0A1B0GVZ2 78 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 RPS10-NUDT3A0A1W2PQS6 291 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 OR11H12B2RN74 326 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 WRBO00258 174 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 MED6O75586 246 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 TOMM40O96008 361 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 IFNA10P01566 189 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
HMGN1-201ENST00000288344 IAPPP10997 89 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 PSG1P11464 419 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 OR10J1P30954 320 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 TAS2R30P59541 319 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 ARL16Q0P5N6 197 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 USF2Q15853 346 aaPredicted RBP6.79□□□□□ -1.32
HMGN1-201ENST00000288344 CT83Q5H943 113 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 ETFRF1Q6IPR1 90 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 SLC16A13Q7RTY0 426 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 DYNLRB2Q8TF09 96 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 C17orf77Q96MU5 243 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 CIB3Q96Q77 187 aaPredicted RBP6.79□□□□□ -1.32
HMGN1-201ENST00000288344 C20orf24Q9BUV8 137 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 AGRNO00468 2067 aa6.79□□□□□ -1.32
HMGN1-201ENST00000288344 IGHV3-49A0A0A0MS15 119 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 C7orf66A4D0T2 115 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 BUB3O43684 328 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 CCNKO75909 580 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 DFFBO76075 338 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 NKX2-1P43699 371 aaPredicted RBP6.78□□□□□ -1.32
HMGN1-201ENST00000288344 CD81P60033 236 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 ZNF90Q03938 601 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 IAH1Q2TAA2 248 aaPredicted RBP6.78□□□□□ -1.32
HMGN1-201ENST00000288344 C16orf54Q6UWD8 224 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 C12orf45Q8N5I9 185 aaPredicted RBP6.78□□□□□ -1.32
HMGN1-201ENST00000288344 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 LYSTQ99698 3801 aa6.78□□□□□ -1.32
HMGN1-201ENST00000288344 IGHV3OR16-13A0A075B7E8 117 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 IGHV3-74A0A0B4J1X5 117 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 TRAV2A0A0B4J234 112 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 SNRPGP15A8MWD9 76 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 CCSO14618 274 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 TSC22D2O75157 780 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 YIF1AO95070 293 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 IFNA21P01568 189 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 IFNA4P05014 189 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 NPPCP23582 126 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 GUCA2BQ16661 112 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 MZT2BQ6NZ67 158 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 TEPPQ6URK8 271 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 GTSCR1Q86UQ5 136 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 DCANP1Q8TF63 244 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 Q8WTZ3 238 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 RAB40CQ96S21 281 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 TRGV9Q99603 122 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 U3KQK5 164 aa6.77□□□□□ -1.32
HMGN1-201ENST00000288344 FNDC10F2Z333 226 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 K7EPK0 472 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 K7EQG2 157 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 CD5P06127 495 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 RD3LP0DJH9 198 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 RAB11AP62491 216 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 LAMTOR1Q6IAA8 161 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 RBPMS2Q6ZRY4 209 aaKnown RBP6.76□□□□□ -1.33
HMGN1-201ENST00000288344 TCF24Q7RTU0 167 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 TMEM144Q7Z5S9 345 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 FAM24BQ8N5W8 94 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 ACY3Q96HD9 319 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 C2orf50Q96LR7 162 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 GINS3Q9BRX5 216 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 IGHV3-66A0A0C4DH42 116 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 INMT-MINDY4F8WBC2 141 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 H0YIZ8 118 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 H3BP45 60 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 PLP1P60201 277 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 ZNF124Q15973 351 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 TOR2AQ5JU69 321 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 OR51G1Q8NGK1 321 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 MS4A6AQ9H2W1 248 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 SRD5A3Q9H8P0 318 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 PSENENQ9NZ42 101 aa6.76□□□□□ -1.33
HMGN1-201ENST00000288344 STRAPQ9Y3F4 350 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms