RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 H3BTX0 84 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 LYPD2Q6UXB3 125 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 TCF21O43680 179 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 APELAP0DMC3 54 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 CD24P25063 80 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 ATP5L2Q7Z4Y8 100 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 SPATA12Q7Z6I5 190 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 ST6GALNAC6Q969X2 333 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 GPR82Q96P67 336 aa10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-201ENST00000286749 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 IGHV3-72A0A0B4J1Y9 119 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 SH2D7A6NKC9 451 aaPredicted RBP10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 M0QZ24 198 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 HBBP68871 147 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 ADIPOQQ15848 244 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 VMA21Q3ZAQ7 101 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 STXBP6Q8NFX7 210 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 PPP1R14DQ9NXH3 145 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 PPIAL4EA0A075B759 164 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 PPIAL4DF5H284 164 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 ENSAO43768 121 aaKnown RBP10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 PPIAL4FP0DN26 164 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 CA7P43166 264 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 FOXA3P55318 350 aaPredicted RBP10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 MRGPRG-AS1Q2M3A8 158 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 TMEM108Q6UXF1 575 aa10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 RBM14Q96PK6 669 aaKnown RBP10.62□□□□□ -0.71
SLC28A1-201ENST00000286749 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 IGLC7A0M8Q6 106 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 IGLL1P15814 213 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 CEACAM8P31997 349 aaPredicted RBP10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 LEMD1Q68G75 181 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 Q6ZVH6 145 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 SSX8Q7RTT4 187 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 GTSF1Q8WW33 167 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 CCL17Q92583 94 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 MLST8Q9BVC4 326 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 MAP1BP46821 2468 aaKnown RBP10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 NDUFB3O43676 98 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 PGLYRP4Q96LB8 373 aa10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
SLC28A1-201ENST00000286749 IGHV2-26A0A0B4J1V2 119 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 CRYGCP07315 174 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 ETFRF1Q6IPR1 90 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 CTSZQ9UBR2 303 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 A8MWL6 223 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 TOMM40O96008 361 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 P01737 135 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 GP9P14770 177 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 LRRC10Q5BKY1 277 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 FAM120AOSQ5T036 256 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 UNQ5815/PRO19632Q6UWF5 114 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 ZNF596Q8TC21 504 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 FMC1Q96HJ9 113 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 TRGV9Q99603 122 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 GSX1Q9H4S2 264 aaPredicted RBP10.6□□□□□ -0.71
SLC28A1-201ENST00000286749 MGAQ8IWI9 3026 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 LTAP01374 205 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 C22orf15Q8WYQ4 148 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 Q9H3A6 140 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 ZNF835Q9Y2P0 537 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 K7EM74 188 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 TCRAP04437 139 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 CNTFRP26992 372 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 ZNF137PP52743 207 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 BSPH1Q075Z2 132 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 IGFL3Q6UXB1 125 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 Q6ZS92 163 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 TP73-AS1Q9UF72 201 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 ABCA1O95477 2261 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 MALRD1Q5VYJ5 2156 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 PCNX1Q96RV3 2341 aa10.59□□□□□ -0.71
SLC28A1-201ENST00000286749 C20orf202A1L168 122 aa10.58□□□□□ -0.72
SLC28A1-201ENST00000286749 SFTPCP11686 197 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms