RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-201ENST00000276573 THYN1Q9P016 225 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 TOMM40O96008 361 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 NBEAP1P0C6P0 100 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SRP14P37108 136 aaKnown RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 YPEL3P61236 119 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 CLEC12BQ2HXU8 276 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 BRD3OSQ6XYD6 125 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 ZNF329Q86UD4 541 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 S4R3C0 116 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 FLNCQ14315 2725 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 USP9XQ93008 2570 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SPTAN1Q13813 2472 aaKnown RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 TRAV40A0A0B4J280 105 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 MDFIC2A0A1B0GVS7 189 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 WI2-2373I1.2A0A1W2PRP0 233 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 B4DSR2 109 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 K7EN84 100 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 TGOLN2O43493 480 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 GNG7O60262 68 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SLC25A16P16260 332 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 HNF1AP20823 631 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 MYCNOSP40205 109 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SNRPEP62304 92 aaKnown RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 ZNF491Q8N8L2 437 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 FAM110DQ8TAY7 271 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-201ENST00000276573 C21orf62Q9NYP8 219 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
TRIM55-201ENST00000276573 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 C5orf52A6NGY3 159 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 F8W735 103 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-201ENST00000276573 GGCTO75223 188 aaKnown RBP7.52□□□□□ -1.21
TRIM55-201ENST00000276573 OR2J3O76001 311 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 S100A6P06703 90 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 SNRPCP09234 159 aaKnown RBP7.52□□□□□ -1.21
TRIM55-201ENST00000276573 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 GP9P14770 177 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H1BP16401 226 aaKnown RBP7.52□□□□□ -1.21
TRIM55-201ENST00000276573 GNG4P50150 75 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 TAS2R60P59551 318 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
TRIM55-201ENST00000276573 LEMD1Q68G75 181 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 TEX38Q6PEX7 206 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 UNQ5815/PRO19632Q6UWF5 114 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 OR10G8Q8NGN5 311 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 BLNKQ8WV28 456 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 TMEM14CQ9P0S9 112 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 FBXL7Q9UJT9 491 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
TRIM55-201ENST00000276573 PGPA6NDG6 321 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 ATP6V0E1O15342 81 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 IGLV2-8P01709 118 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TRGC2P03986 189 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 FOXL1Q12952 345 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 Q56UQ5 140 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF600Q6ZNG1 722 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TMEM68Q96MH6 324 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TXN2Q99757 166 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 SHANK2-AS3Q9BTD1 123 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 HIF1ANQ9NWT6 349 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 EPDR1Q9UM22 224 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TRAV20A0A0B4J274 112 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 SH2D7A6NKC9 451 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H1EP10412 219 aaKnown RBP7.51□□□□□ -1.21
TRIM55-201ENST00000276573 FAM3BP58499 235 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TMEM219Q86XT9 240 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 VN1R17PQ8TDU5 208 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 RNF125Q96EQ8 232 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 LINC00479Q96M42 142 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 TCEAL7Q9BRU2 100 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 MOB4Q9Y3A3 225 aa7.51□□□□□ -1.21
TRIM55-201ENST00000276573 SOX21Q9Y651 276 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-201ENST00000276573 A0A096LNT2 108 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 H3BRN7 92 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 AP4M1O00189 453 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 PEX7O00628 323 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 AVPP01185 164 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 GCGP01275 180 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 AMY1AP04745 511 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 IL4P05112 153 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 CTSGP08311 255 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 GATA3P23771 443 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 COL8A1P27658 744 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 FCGR2BP31994 310 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-201ENST00000276573 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
TRIM55-201ENST00000276573 OR5I1Q13606 314 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms