RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 TEX45Q8NA69 505 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 CCL3L1P16619 93 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 HBBP68871 147 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
COL8A1-202ENST00000273342 WT1-ASQ06250 92 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 FAM120AOSQ5T036 256 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 PNKDQ8N490 385 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 CHEK1O14757 476 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 ZNF257Q9Y2Q1 563 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 AKAP6Q13023 2319 aa10.43□□□□□ -0.74
COL8A1-202ENST00000273342 ZZEF1O43149 2961 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 P01737 135 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 ACP1P24666 158 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 PPIAL4DF5H284 164 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 FAM87AP0C7U9 286 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 PSG9Q00887 426 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 LRRC10Q5BKY1 277 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 CIARTQ8N365 385 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-202ENST00000273342 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
COL8A1-202ENST00000273342 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 EPDR1Q9UM22 224 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 A0A1W2PRD5 423 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 A0A1W2PRF3 423 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 A0A1W2PRM7 423 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 CGB3P0DN86 165 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 CGB7P0DN87 165 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 DLX1P56177 255 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 KLF5Q13887 457 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-202ENST00000273342 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-202ENST00000273342 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
COL8A1-202ENST00000273342 DLL1O00548 723 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 RIPPLY3P57055 190 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 CCL8P80075 99 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 FER1L6-AS2Q96M78 137 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 ZPBPQ9BS86 351 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 hADV38S2A0JD32 116 aa10.41□□□□□ -0.74
COL8A1-202ENST00000273342 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
COL8A1-202ENST00000273342 WT1P19544 449 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-202ENST00000273342 RPP21Q9H633 154 aaKnown RBP10.41□□□□□ -0.74
COL8A1-202ENST00000273342 SPTAN1Q13813 2472 aaKnown RBP10.4□□□□□ -0.74
COL8A1-202ENST00000273342 SVEP1Q4LDE5 3571 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 SAP30O75446 220 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 SPOCK3Q9BQ16 436 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 MRPL32Q9BYC8 188 aaKnown RBP10.4□□□□□ -0.74
COL8A1-202ENST00000273342 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-202ENST00000273342 SH3BGRL2Q9UJC5 107 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 APC2O95996 2303 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 LOC389332A0A1B0GUA5 103 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 SLC25A17O43808 307 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 OR2J3O76001 311 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 NBEAP1P0C6P0 100 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 COL8A1P27658 744 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 RITA1Q96K30 269 aa10.4□□□□□ -0.74
COL8A1-202ENST00000273342 CACNA1BQ00975 2339 aa10.4□□□□□ -0.75
COL8A1-202ENST00000273342 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 HTR1DP28221 377 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 BPIFB3P59826 476 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 MBNL2Q5VZF2 373 aaKnown RBP10.39□□□□□ -0.75
COL8A1-202ENST00000273342 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 PRNTQ86SH4 94 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 FDCSPQ8NFU4 85 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 H1FXQ92522 213 aaKnown RBP10.39□□□□□ -0.75
COL8A1-202ENST00000273342 ADTRPQ96IZ2 230 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 GPR82Q96P67 336 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 C19orf24Q9BVV8 132 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 MAP1LC3CQ9BXW4 147 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 OTOGLQ3ZCN5 2332 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 BHLHA15Q7RTS1 189 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-202ENST00000273342 EXOC3-AS1Q8N2X6 119 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 RPRMLQ8N4K4 120 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 NDUFA4L2Q9NRX3 87 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 HILPDAQ9Y5L2 63 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 A8MWL6 223 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 NCR2O95944 276 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 ARF6P62330 175 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-202ENST00000273342 CR1LQ2VPA4 569 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 SARAFQ96BY9 339 aa10.39□□□□□ -0.75
COL8A1-202ENST00000273342 CEP295Q9C0D2 2601 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 C22orf46C9J442 243 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms