RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 PSG4Q00888 419 aa13.27□□□□□ -0.29
UBR3-201ENST00000272793 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.29
UBR3-201ENST00000272793 TTTY12Q9BZ98 90 aa13.27□□□□□ -0.29
UBR3-201ENST00000272793 SAP30O75446 220 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 PFN2P35080 140 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 KLRD1Q13241 179 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 ANKRD39Q53RE8 183 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 TNFSF13O75888 250 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 PLXNA3P51805 1871 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 C19orf48Q6RUI8 117 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 IFITM2Q01629 132 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 PLAC1Q9HBJ0 212 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 PILRBQ9UKJ0 227 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 LTBP3Q9NS15 1303 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 UPK3AO75631 287 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 IGLV3-25P01717 112 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 PMVKQ15126 192 aa13.26□□□□□ -0.29
UBR3-201ENST00000272793 NHLRC3Q5JS37 347 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 VCYO14598 125 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 PPBPP02775 128 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
UBR3-201ENST00000272793 DAD1P61803 113 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 KLF17Q5JT82 389 aaPredicted RBP13.25□□□□□ -0.29
UBR3-201ENST00000272793 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 TBX6O95947 436 aaPredicted RBP13.25□□□□□ -0.29
UBR3-201ENST00000272793 HLA-DQB1P01920 261 aa13.25□□□□□ -0.29
UBR3-201ENST00000272793 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
UBR3-201ENST00000272793 WBP1LQ9NX94 342 aa13.24□□□□□ -0.29
UBR3-201ENST00000272793 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
UBR3-201ENST00000272793 IGHV5-10-1A0A0J9YXX1 117 aa13.24□□□□□ -0.29
UBR3-201ENST00000272793 C5orf66Q9H5L9 145 aa13.24□□□□□ -0.29
UBR3-201ENST00000272793 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
UBR3-201ENST00000272793 FOXL2P58012 376 aa13.24□□□□□ -0.29
UBR3-201ENST00000272793 SHISA9B4DS77 424 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 SRSF8Q9BRL6 282 aaKnown RBP13.23□□□□□ -0.29
UBR3-201ENST00000272793 CFHR5Q9BXR6 569 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 CRIM1Q9NZV1 1036 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 CRLF1O75462 422 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 Q6ZNB5 142 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 TEX48A0A1B0GUV7 120 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 RAMP1O60894 148 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 RICTORQ6R327 1708 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 JPT1Q9UK76 154 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 FOXG1P55316 489 aaPredicted RBP13.23□□□□□ -0.29
UBR3-201ENST00000272793 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 D6R8Y8 96 aa13.23□□□□□ -0.29
UBR3-201ENST00000272793 KLF14Q8TD94 323 aaPredicted RBP13.23□□□□□ -0.29
UBR3-201ENST00000272793 CTGFP29279 349 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 MPV17L2Q567V2 206 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 SCN7AQ01118 1682 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 K7ERS5 55 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 CCL4P13236 92 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 SMRP1Q8NCR6 262 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 THBDP07204 575 aa13.22□□□□□ -0.29
UBR3-201ENST00000272793 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
UBR3-201ENST00000272793 RPUSD1Q9UJJ7 312 aaKnown RBP13.22□□□□□ -0.29
UBR3-201ENST00000272793 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
UBR3-201ENST00000272793 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
UBR3-201ENST00000272793 PRR33A8MZF0 331 aa13.21□□□□□ -0.29
UBR3-201ENST00000272793 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
UBR3-201ENST00000272793 ISXQ2M1V0 245 aa13.21□□□□□ -0.29
UBR3-201ENST00000272793 RNF183Q96D59 192 aa13.21□□□□□ -0.29
UBR3-201ENST00000272793 SP9P0CG40 484 aa13.21□□□□□ -0.29
UBR3-201ENST00000272793 RPL23P62829 140 aaKnown RBP13.21□□□□□ -0.29
UBR3-201ENST00000272793 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
UBR3-201ENST00000272793 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.3
UBR3-201ENST00000272793 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.3
UBR3-201ENST00000272793 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.3
UBR3-201ENST00000272793 CRYBA4P53673 196 aa13.21□□□□□ -0.3
UBR3-201ENST00000272793 MRPL55Q7Z7F7 128 aaKnown RBP13.21□□□□□ -0.3
UBR3-201ENST00000272793 ZNF362Q5T0B9 420 aaPredicted RBP13.21□□□□□ -0.3
UBR3-201ENST00000272793 ATRAIDQ6UW56 229 aa13.21□□□□□ -0.3
UBR3-201ENST00000272793 UBE2BP63146 152 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 C1QCP02747 245 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.2□□□□□ -0.3
UBR3-201ENST00000272793 PLPPR1Q8TBJ4 325 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 VSIRQ9H7M9 311 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 A8MWP6 167 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 CD24P25063 80 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 DPM3Q9P2X0 92 aa13.2□□□□□ -0.3
UBR3-201ENST00000272793 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
UBR3-201ENST00000272793 UCP1P25874 307 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 ZIC4Q8N9L1 334 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms