RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SFTA3P0C7M3 94 aa19.2■□□□□ 0.66
SSBP4-201ENST00000270061 SELENOTP62341 195 aa19.2■□□□□ 0.66
SSBP4-201ENST00000270061 TRGV9Q99603 122 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 LOC102723971A0A1B0GUV8 181 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 M0QZK8 103 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 APOC3P02656 99 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 RHOBP62745 196 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 ICAM4Q14773 271 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 HAGHQ16775 308 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 TMEM95Q3KNT9 176 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 HSPB9Q9BQS6 159 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 SLC35B3Q9H1N7 401 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 GNG13Q9P2W3 67 aa19.19■□□□□ 0.66
SSBP4-201ENST00000270061 IFNA1P01562 189 aa19.18■□□□□ 0.66
SSBP4-201ENST00000270061 IGHV3-48P01763 117 aa19.18■□□□□ 0.66
SSBP4-201ENST00000270061 HSPB1P04792 205 aaKnown RBP19.18■□□□□ 0.66
SSBP4-201ENST00000270061 TMEM68Q96MH6 324 aa19.18■□□□□ 0.66
SSBP4-201ENST00000270061 IGLV11-55A0A075B6I3 123 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 ZFP92A6NM28 416 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 STAG3L2P0CL84 134 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 STAG3L3P0CL85 134 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 BCL2P10415 239 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 TAGLN2P37802 199 aaKnown RBP19.17■□□□□ 0.66
SSBP4-201ENST00000270061 KLK9Q2XQG4 91 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 OR4X1Q8NH49 305 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 FANCD2OSQ96PS1 177 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 KLK9Q9UKQ9 250 aa19.17■□□□□ 0.66
SSBP4-201ENST00000270061 K7EIM0 57 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 HMGB3O15347 200 aaKnown RBP19.16■□□□□ 0.66
SSBP4-201ENST00000270061 EIF3GO75821 320 aaKnown RBP eCLIP19.16■□□□□ 0.66
SSBP4-201ENST00000270061 PPT1P50897 306 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 HIST2H2BDQ6DRA6 164 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 SLC35E3Q7Z769 313 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 AMY1AP04745 511 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 GATA2P23769 480 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-201ENST00000270061 PSMB3P49720 205 aa19.16■□□□□ 0.66
SSBP4-201ENST00000270061 NDUFS6O75380 124 aaKnown RBP19.15■□□□□ 0.66
SSBP4-201ENST00000270061 WIPF2Q8TF74 440 aaPredicted RBP19.15■□□□□ 0.66
SSBP4-201ENST00000270061 GATAD1Q8WUU5 269 aa19.15■□□□□ 0.66
SSBP4-201ENST00000270061 SEPSECSQ9HD40 501 aaKnown RBP19.15■□□□□ 0.66
SSBP4-201ENST00000270061 MANBALQ9NQG1 85 aa19.15■□□□□ 0.66
SSBP4-201ENST00000270061 VAX2Q9UIW0 290 aa19.15■□□□□ 0.66
SSBP4-201ENST00000270061 PSMB11A5LHX3 300 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 SRP19P09132 144 aaKnown RBP19.14■□□□□ 0.66
SSBP4-201ENST00000270061 OR5G3P0C626 314 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 ZNF90Q03938 601 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 SVBPQ8N300 66 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 FAM110DQ8TAY7 271 aaPredicted RBP19.14■□□□□ 0.66
SSBP4-201ENST00000270061 RNF2Q99496 336 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 FUT9Q9Y231 359 aa19.14■□□□□ 0.66
SSBP4-201ENST00000270061 SH2D7A6NKC9 451 aaPredicted RBP19.14■□□□□ 0.65
SSBP4-201ENST00000270061 ATP6V0E1O15342 81 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 CXorf1O96002 111 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 CD28P10747 220 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 AKIRIN2Q53H80 203 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 C9orf152Q5JTZ5 239 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 RXFP4Q8TDU9 374 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 TMPRSS5Q9H3S3 457 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 THYN1Q9P016 225 aa19.14■□□□□ 0.65
SSBP4-201ENST00000270061 IGHV3-21A0A0B4J1V1 117 aa19.13■□□□□ 0.65
SSBP4-201ENST00000270061 CRIP2P52943 208 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-201ENST00000270061 DEFA5Q01523 94 aa19.13■□□□□ 0.65
SSBP4-201ENST00000270061 FAM78BQ5VT40 261 aa19.13■□□□□ 0.65
SSBP4-201ENST00000270061 DNAJC4Q9NNZ3 241 aa19.13■□□□□ 0.65
SSBP4-201ENST00000270061 CLN5O75503 358 aa19.12■□□□□ 0.65
SSBP4-201ENST00000270061 HIST1H1BP16401 226 aaKnown RBP19.12■□□□□ 0.65
SSBP4-201ENST00000270061 OR1L4Q8NGR5 311 aa19.12■□□□□ 0.65
SSBP4-201ENST00000270061 TMEM37Q8WXS4 190 aa19.12■□□□□ 0.65
SSBP4-201ENST00000270061 PFDN5Q99471 154 aa19.12■□□□□ 0.65
SSBP4-201ENST00000270061 MRPL32Q9BYC8 188 aaKnown RBP19.12■□□□□ 0.65
SSBP4-201ENST00000270061 IGLC1P0CG04 106 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 UNQ5815/PRO19632Q6UWF5 114 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 OR5T1Q8NG75 326 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 OR5AU1Q8NGC0 362 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 GUCA2BQ16661 112 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 SPATA31B1PQ5VZV4 182 aa19.11■□□□□ 0.65
SSBP4-201ENST00000270061 CITED2Q99967 270 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-201ENST00000270061 ARL14EPLP0DKL9 152 aa19.1■□□□□ 0.65
SSBP4-201ENST00000270061 PLP1P60201 277 aa19.1■□□□□ 0.65
SSBP4-201ENST00000270061 NSUN5P1Q3KNT7 163 aa19.1■□□□□ 0.65
SSBP4-201ENST00000270061 TECRQ9NZ01 308 aaKnown RBP19.1■□□□□ 0.65
SSBP4-201ENST00000270061 NOTCH3Q9UM47 2321 aa19.1■□□□□ 0.65
SSBP4-201ENST00000270061 ELOA3CA0A087WX78 387 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-201ENST00000270061 MIR17HGQ75NE6 70 aa19.09■□□□□ 0.65
SSBP4-201ENST00000270061 NDUFA11Q86Y39 141 aa19.09■□□□□ 0.65
SSBP4-201ENST00000270061 LINC01548A6NM66 108 aa19.09■□□□□ 0.65
SSBP4-201ENST00000270061 NPBWR1P48145 328 aa19.09■□□□□ 0.65
SSBP4-201ENST00000270061 MEF2BQ02080 365 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-201ENST00000270061 SOHLH1Q5JUK2 328 aa19.09■□□□□ 0.65
SSBP4-201ENST00000270061 TRAV30A0A087WSZ9 112 aa19.08■□□□□ 0.64
SSBP4-201ENST00000270061 COX7A2P2O60397 106 aa19.08■□□□□ 0.64
SSBP4-201ENST00000270061 MFAP4P55083 255 aa19.08■□□□□ 0.64
SSBP4-201ENST00000270061 TAS2R45P59539 299 aa19.08■□□□□ 0.64
SSBP4-201ENST00000270061 SCO1O75880 301 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 SNAPINO95295 136 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 FABP1P07148 127 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 GCHFRP30047 84 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 FCGR2BP31994 310 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-201ENST00000270061 ECSCRQ19T08 205 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 C19orf54Q5BKX5 351 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms