RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 USF2Q15853 346 aaPredicted RBP9.62□□□□□ -0.87
SS18-202ENST00000269138 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 OR51G1Q8NGK1 321 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 GINS3Q9BRX5 216 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 TECRQ9NZ01 308 aaKnown RBP9.62□□□□□ -0.87
SS18-202ENST00000269138 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
SS18-202ENST00000269138 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 FNDC10F2Z333 226 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 IL4P05112 153 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 EWSR1Q01844 656 aaKnown RBP eCLIP9.61□□□□□ -0.87
SS18-202ENST00000269138 STX12Q86Y82 276 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 TMEM61Q8N0U2 210 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 ST8SIA2Q92186 375 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 GGACTQ9BVM4 153 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 NPVFQ9HCQ7 196 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 K7EIL1 84 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 GIPP09681 153 aaPredicted RBP9.61□□□□□ -0.87
SS18-202ENST00000269138 GP9P14770 177 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 NPPCP23582 126 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 CRYBB3P26998 211 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 LCN12Q6JVE5 192 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 METTL26Q96S19 204 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 RNF2Q99496 336 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 SLC25A31Q9H0C2 315 aa9.61□□□□□ -0.87
SS18-202ENST00000269138 ZMAT5Q9UDW3 170 aaKnown RBP9.61□□□□□ -0.87
SS18-202ENST00000269138 PET100P0DJ07 73 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 LYL1P12980 280 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 S100A11P31949 105 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 LYZP61626 148 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 GUCA2BQ16661 112 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 RNF125Q96EQ8 232 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 PBDC1Q9BVG4 233 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 VSIRQ9H7M9 311 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 LSM4Q9Y4Z0 139 aaKnown RBP9.6□□□□□ -0.87
SS18-202ENST00000269138 U3KQE9 123 aa9.6□□□□□ -0.87
SS18-202ENST00000269138 FABP1P07148 127 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 RAP2BP61225 183 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 HBG1P69891 147 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 HBG2P69892 147 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 VWC2Q2TAL6 325 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 TEPPQ6URK8 271 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 Q6ZNX1 250 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 THAP6Q8TBB0 222 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 MGST2Q99735 147 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 TMEM147Q9BVK8 224 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 SORL1Q92673 2214 aa9.59□□□□□ -0.87
SS18-202ENST00000269138 UBE2L5PA0A1B0GUS4 154 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 AGPAT2O15120 278 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 DFFBO76075 338 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
SS18-202ENST00000269138 RPL12P30050 165 aaKnown RBP9.58□□□□□ -0.88
SS18-202ENST00000269138 CLINT1Q14677 625 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 FAM90A2PQ658T7 463 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 RBPMS2Q6ZRY4 209 aaKnown RBP9.58□□□□□ -0.88
SS18-202ENST00000269138 OR5C1Q8NGR4 320 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 WDR83OSQ9Y284 106 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 HSPB11Q9Y547 144 aa9.58□□□□□ -0.88
SS18-202ENST00000269138 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 G3V3Q6 166 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 BAXQ07812 192 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 ATP6V1FQ16864 119 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 Q8N1Y9 231 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 BPIFCQ8NFQ6 507 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 OR2T35Q8NGX2 323 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 ASB13Q8WXK3 278 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 SMIM3Q9BZL3 60 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 DOK5Q9P104 306 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 SLC45A2Q9UMX9 530 aa9.57□□□□□ -0.88
SS18-202ENST00000269138 SMLR1H3BR10 107 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 TSPAN4O14817 238 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 ORM2P19652 201 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 EIF2B2P49770 351 aaKnown RBP9.56□□□□□ -0.88
SS18-202ENST00000269138 LAMTOR1Q6IAA8 161 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 GBGT1Q8N5D6 347 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 WFDC1Q9HC57 220 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 A0A1W2PS18 150 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 BUB3O43684 328 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
SS18-202ENST00000269138 CD7P09564 240 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 LINC00869P0C866 280 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 FGF7P21781 194 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 TFPI2P48307 235 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 CAMLGP49069 296 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 SELENOTP62341 195 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 FGL1Q08830 312 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 DEFB121Q5J5C9 76 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
SS18-202ENST00000269138 NARS2Q96I59 477 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms