RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 C11orf44Q8N8P7 122 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 FER1L6-AS1Q8NA97 138 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 KCNS1Q96KK3 526 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 TLN1Q9Y490 2541 aaKnown RBP12.62□□□□□ -0.39
TIMP3-201ENST00000266085 K7EM74 188 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 ZNF25P17030 456 aaPredicted RBP12.62□□□□□ -0.39
TIMP3-201ENST00000266085 PAPPA-AS1Q5QFB9 102 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 C8orf46Q8TAG6 207 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 FAM209BQ5JX69 171 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 COL5A1-AS1Q5SY13 56 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 VDAC2P45880 294 aaPredicted RBP12.61□□□□□ -0.39
TIMP3-201ENST00000266085 C5orf64Q2M2E5 130 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 A0A1B0GW15 77 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 BUB1B-PAK6H3BSN5 160 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
TIMP3-201ENST00000266085 LMO1P25800 156 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 RPL24P83731 157 aaKnown RBP12.61□□□□□ -0.39
TIMP3-201ENST00000266085 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 PET117Q6UWS5 81 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 ASCL2Q99929 193 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 TRAV1-1A0A0B4J248 108 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 H3BUX3 64 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 PPP1R17O96001 155 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 OSTCQ9NRP0 149 aa12.61□□□□□ -0.39
TIMP3-201ENST00000266085 H7C1H1 209 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 PAX8Q06710 450 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
TIMP3-201ENST00000266085 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 C12orf54Q6X4T0 127 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 IGKV1-6A0A0C4DH72 117 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 A0A1B0GWJ7 208 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 IZUMO1RA6ND01 250 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 PSG1P11464 419 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 TMEM155Q4W5P6 130 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 Q6ZRM9 215 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 A0A0G2JRQ6 117 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 CD5P06127 495 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 CRXO43186 299 aaPredicted RBP12.6□□□□□ -0.39
TIMP3-201ENST00000266085 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
TIMP3-201ENST00000266085 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
TIMP3-201ENST00000266085 PRR14LQ5THK1 2151 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 SSC4DQ8WTU2 575 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 JMJD8Q96S16 334 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 TMEM238LA0A1B0GVL6 79 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 A6NJY4 79 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 KIR3DL3Q8N743 410 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 PRO3102Q9H379 93 aa12.59□□□□□ -0.39
TIMP3-201ENST00000266085 ITGB1BP1O14713 200 aa12.58□□□□□ -0.39
TIMP3-201ENST00000266085 IGLV1-44P01699 117 aa12.58□□□□□ -0.39
TIMP3-201ENST00000266085 PRTN3P24158 256 aa12.58□□□□□ -0.39
TIMP3-201ENST00000266085 GATA4P43694 442 aa12.58□□□□□ -0.39
TIMP3-201ENST00000266085 ATOH7Q8N100 152 aa12.58□□□□□ -0.39
TIMP3-201ENST00000266085 NPFFO15130 113 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 DKK1O94907 266 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 IGKV1-16P04430 117 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 DDTP30046 118 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 WDR86Q86TI4 376 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 ORMDL3Q8N138 153 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
TIMP3-201ENST00000266085 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
TIMP3-201ENST00000266085 PRSS2P07478 247 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 SP5Q6BEB4 398 aaPredicted RBP12.58□□□□□ -0.4
TIMP3-201ENST00000266085 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 ZNRD1Q9P1U0 126 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 C7orf71A4D174 169 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 PAX1P15863 534 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 TEX38Q6PEX7 206 aa12.58□□□□□ -0.4
TIMP3-201ENST00000266085 MGST2Q99735 147 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
TIMP3-201ENST00000266085 PMS2P5A8MQ11 134 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 FAM71F2Q6NXP2 309 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 ZNF414Q96IQ9 312 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 C15orf62A8K5M9 175 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 RNASE4P34096 147 aaKnown RBP12.57□□□□□ -0.4
TIMP3-201ENST00000266085 HINT1P49773 126 aaPredicted RBP12.57□□□□□ -0.4
TIMP3-201ENST00000266085 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 TBL2Q9Y4P3 447 aaKnown RBP12.57□□□□□ -0.4
TIMP3-201ENST00000266085 A0A1W2PNU3 283 aaPredicted RBP12.57□□□□□ -0.4
TIMP3-201ENST00000266085 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 TRGV9Q99603 122 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
TIMP3-201ENST00000266085 LTBP2Q14767 1821 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 RNF138Q8WVD3 245 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
TIMP3-201ENST00000266085 SOD3P08294 240 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 CBY1Q9Y3M2 126 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 GCSHP23434 173 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms