RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 OR11H6Q8NGC7 330 aa11.62□□□□□ -0.55
PDLIM2-201ENST00000265810 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
PDLIM2-201ENST00000265810 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 FAM3BP58499 235 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 C19orf35Q6ZS72 473 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 G3V318 75 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 POU2AF1Q16633 256 aa11.61□□□□□ -0.55
PDLIM2-201ENST00000265810 H0Y8G0 127 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 RAB5AP20339 215 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 PAX8Q06710 450 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 C5orf30Q96GV9 206 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 HIST1H2BAQ96A08 127 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 SRD5A3Q9H8P0 318 aa11.6□□□□□ -0.55
PDLIM2-201ENST00000265810 STAG3L2P0CL84 134 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 STAG3L3P0CL85 134 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 IER3P46695 156 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 TRGV9Q99603 122 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 Q9H3A6 140 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 UTF1Q5T230 341 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 J3QLI3 93 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 PF4P02776 101 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 MFAP2P55001 183 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 IL17RELQ6ZVW7 336 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 PTPRBP23467 1997 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 A8MWL6 223 aa11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 EIF4E3Q8N5X7 224 aaKnown RBP11.59□□□□□ -0.55
PDLIM2-201ENST00000265810 PEX7O00628 323 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 LINC00469Q8N7U9 141 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 IGKV3-20P01619 116 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 CGB3P0DN86 165 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 CGB7P0DN87 165 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 Q8N7P7 452 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 SELENOKQ9Y6D0 94 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 F5H697 171 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 SRD5A1P18405 259 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 TCF23Q7RTU1 214 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 TNCP24821 2201 aa11.58□□□□□ -0.56
PDLIM2-201ENST00000265810 FASNP49327 2511 aaKnown RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 IGLV1-47P01700 117 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 TMEM249Q2WGJ8 235 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 HAPLN4Q86UW8 402 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 RITA1Q96K30 269 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 SONP18583 2426 aaKnown RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 CPAMD8Q8IZJ3 1885 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 TMEM189A5PLL7 270 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 GNG5P63218 68 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 HIST1H1AQ02539 215 aaPredicted RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 DDB2Q92466 427 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 HSBP1O75506 76 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 Q71RC1 249 aaPredicted RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 ODF3L1Q8IXM7 274 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 KMT2EQ8IZD2 1858 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 NDUFB8O95169 186 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 RPL15P61313 204 aaKnown RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 TBX15Q96SF7 602 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 CARHSP1Q9Y2V2 147 aaKnown RBP11.57□□□□□ -0.56
PDLIM2-201ENST00000265810 COL6A3P12111 3177 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 HSBP1L1C9JCN9 74 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 SNRPEP62304 92 aaKnown RBP11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 NOL4LQ96MY1 436 aaPredicted RBP11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 C12orf57Q99622 126 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 ZNF292O60281 2723 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 RIGQ13278 110 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 ZNF841Q6ZN19 808 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 PCSK5Q92824 1860 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 PMS2P5A8MQ11 134 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 GGCTO75223 188 aaKnown RBP11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 PROP1O75360 226 aa11.56□□□□□ -0.56
PDLIM2-201ENST00000265810 A0A1W2PRE2 83 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 TEX38Q6PEX7 206 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 FNDC10F2Z333 226 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 LMO4P61968 165 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 C11orf71Q6IPW1 123 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 SIGLECL1Q8N7X8 197 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 NAV3Q8IVL0 2385 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms