RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 A0A1B0GXF2 115 aa8.82□□□□□ -1
MSH3-201ENST00000265081 F8W735 103 aaPredicted RBP8.82□□□□□ -1
MSH3-201ENST00000265081 H3BRN7 92 aa8.82□□□□□ -1
MSH3-201ENST00000265081 HYPMO75409 117 aa8.82□□□□□ -1
MSH3-201ENST00000265081 IGLV2-11P01706 119 aa8.82□□□□□ -1
MSH3-201ENST00000265081 FRMD6-AS1P0C7T7 363 aa8.82□□□□□ -1
MSH3-201ENST00000265081 MISP3Q96FF7 219 aa8.82□□□□□ -1
MSH3-201ENST00000265081 TIMD4Q96H15 378 aa8.82□□□□□ -1
MSH3-201ENST00000265081 RBM14Q96PK6 669 aaKnown RBP8.82□□□□□ -1
MSH3-201ENST00000265081 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
MSH3-201ENST00000265081 LOC105371242A0A075B767 164 aa8.82□□□□□ -1
MSH3-201ENST00000265081 GATCO43716 136 aaKnown RBP8.82□□□□□ -1
MSH3-201ENST00000265081 AMY1AP04745 511 aa8.82□□□□□ -1
MSH3-201ENST00000265081 HNF1AP20823 631 aa8.82□□□□□ -1
MSH3-201ENST00000265081 GPR6P46095 362 aaPredicted RBP8.82□□□□□ -1
MSH3-201ENST00000265081 ATG101Q9BSB4 218 aa8.82□□□□□ -1
MSH3-201ENST00000265081 CBLN1P23435 193 aa8.81□□□□□ -1
MSH3-201ENST00000265081 CEACAM3P40198 252 aa8.81□□□□□ -1
MSH3-201ENST00000265081 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
MSH3-201ENST00000265081 C22orf15Q8WYQ4 148 aa8.81□□□□□ -1
MSH3-201ENST00000265081 IGLC2P0DOY2 106 aa8.81□□□□□ -1
MSH3-201ENST00000265081 PAFAH1B2P68402 229 aa8.81□□□□□ -1
MSH3-201ENST00000265081 SFTPCP11686 197 aa8.81□□□□□ -1
MSH3-201ENST00000265081 ATP5L2Q7Z4Y8 100 aa8.81□□□□□ -1
MSH3-201ENST00000265081 OR8I2Q8N0Y5 310 aa8.81□□□□□ -1
MSH3-201ENST00000265081 C5orf17Q8NAS9 161 aa8.81□□□□□ -1
MSH3-201ENST00000265081 OTORQ9NRC9 128 aa8.81□□□□□ -1
MSH3-201ENST00000265081 ONECUT1Q9UBC0 465 aa8.81□□□□□ -1
MSH3-201ENST00000265081 NAV3Q8IVL0 2385 aa8.81□□□□□ -1
MSH3-201ENST00000265081 PSG1P11464 419 aa8.8□□□□□ -1
MSH3-201ENST00000265081 LINC00479Q96M42 142 aa8.8□□□□□ -1
MSH3-201ENST00000265081 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
MSH3-201ENST00000265081 SHANK2-AS3Q9BTD1 123 aa8.8□□□□□ -1
MSH3-201ENST00000265081 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
MSH3-201ENST00000265081 WNT10AQ9GZT5 417 aa8.8□□□□□ -1
MSH3-201ENST00000265081 GFRA4Q9GZZ7 299 aa8.8□□□□□ -1
MSH3-201ENST00000265081 OR2J3O76001 311 aa8.8□□□□□ -1
MSH3-201ENST00000265081 NBEAP1P0C6P0 100 aa8.8□□□□□ -1
MSH3-201ENST00000265081 COX7A1P24310 79 aa8.8□□□□□ -1
MSH3-201ENST00000265081 C5orf64Q2M2E5 130 aa8.8□□□□□ -1
MSH3-201ENST00000265081 LYPD1Q8N2G4 141 aa8.8□□□□□ -1
MSH3-201ENST00000265081 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
MSH3-201ENST00000265081 EGR2P11161 476 aaPredicted RBP8.8□□□□□ -1
MSH3-201ENST00000265081 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
MSH3-201ENST00000265081 ZNF562Q6V9R5 426 aa8.8□□□□□ -1
MSH3-201ENST00000265081 COX8CQ7Z4L0 72 aa8.8□□□□□ -1
MSH3-201ENST00000265081 DYNAPQ8N1N2 210 aa8.8□□□□□ -1
MSH3-201ENST00000265081 GATD1Q8NB37 220 aa8.8□□□□□ -1
MSH3-201ENST00000265081 NUDT10Q8NFP7 164 aa8.8□□□□□ -1
MSH3-201ENST00000265081 FAM168AQ92567 244 aa8.8□□□□□ -1
MSH3-201ENST00000265081 NUDT11Q96G61 164 aa8.8□□□□□ -1
MSH3-201ENST00000265081 NOL4LQ96MY1 436 aaPredicted RBP8.8□□□□□ -1
MSH3-201ENST00000265081 CHRDL1Q9BU40 450 aa8.8□□□□□ -1
MSH3-201ENST00000265081 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
MSH3-201ENST00000265081 HIGD1AQ9Y241 93 aa8.8□□□□□ -1
MSH3-201ENST00000265081 TBL2Q9Y4P3 447 aaKnown RBP8.8□□□□□ -1
MSH3-201ENST00000265081 IGHV3-48P01763 117 aa8.8□□□□□ -1
MSH3-201ENST00000265081 ZFP36P26651 326 aaKnown RBP8.8□□□□□ -1
MSH3-201ENST00000265081 OR1B1Q8NGR6 318 aa8.8□□□□□ -1
MSH3-201ENST00000265081 TSKUQ8WUA8 353 aa8.8□□□□□ -1
MSH3-201ENST00000265081 FAM231BA6NCW3 169 aa8.79□□□□□ -1
MSH3-201ENST00000265081 HLA-DQA1P01909 254 aa8.79□□□□□ -1
MSH3-201ENST00000265081 TCRAP04437 139 aa8.79□□□□□ -1
MSH3-201ENST00000265081 PTPRQQ9UMZ3 2332 aa8.79□□□□□ -1
MSH3-201ENST00000265081 LRBAP50851 2863 aa8.79□□□□□ -1
MSH3-201ENST00000265081 KIR2DL5BA0A0G2JN68 375 aa8.79□□□□□ -1
MSH3-201ENST00000265081 KIR2DL5BA0A0G2JPC4 375 aa8.79□□□□□ -1
MSH3-201ENST00000265081 A8MWP6 167 aa8.79□□□□□ -1
MSH3-201ENST00000265081 ZNF600Q6ZNG1 722 aa8.79□□□□□ -1
MSH3-201ENST00000265081 VMO1Q7Z5L0 202 aa8.79□□□□□ -1
MSH3-201ENST00000265081 LHFPL4Q7Z7J7 247 aa8.79□□□□□ -1
MSH3-201ENST00000265081 KIR2DL5AQ8N109 375 aa8.79□□□□□ -1
MSH3-201ENST00000265081 GPR82Q96P67 336 aa8.79□□□□□ -1
MSH3-201ENST00000265081 APC2O95996 2303 aa8.79□□□□□ -1
MSH3-201ENST00000265081 A0A1B0GUS0 222 aa8.79□□□□□ -1
MSH3-201ENST00000265081 ZNF785A8K8V0 405 aa8.79□□□□□ -1
MSH3-201ENST00000265081 HIST1H1EP10412 219 aaKnown RBP8.79□□□□□ -1
MSH3-201ENST00000265081 ZNF491Q8N8L2 437 aa8.79□□□□□ -1
MSH3-201ENST00000265081 ITLN2Q8WWU7 325 aaPredicted RBP8.79□□□□□ -1
MSH3-201ENST00000265081 TMEM68Q96MH6 324 aa8.79□□□□□ -1
MSH3-201ENST00000265081 LY6HO94772 140 aa8.78□□□□□ -1
MSH3-201ENST00000265081 FOXA3P55318 350 aaPredicted RBP8.78□□□□□ -1
MSH3-201ENST00000265081 PRB3Q04118 309 aaPredicted RBP8.78□□□□□ -1
MSH3-201ENST00000265081 CCDC144NLQ6NUI1 221 aa8.78□□□□□ -1
MSH3-201ENST00000265081 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
MSH3-201ENST00000265081 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
MSH3-201ENST00000265081 C14orf144Q96I85 54 aa8.78□□□□□ -1
MSH3-201ENST00000265081 PSMG3-AS1Q96PY0 264 aa8.78□□□□□ -1
MSH3-201ENST00000265081 Q9H3A6 140 aa8.78□□□□□ -1
MSH3-201ENST00000265081 SNURFLB1AK76 121 aa8.78□□□□□ -1
MSH3-201ENST00000265081 VWC2LB2RUY7 222 aa8.78□□□□□ -1
MSH3-201ENST00000265081 BMPR1BO00238 502 aa8.78□□□□□ -1
MSH3-201ENST00000265081 IER3P46695 156 aa8.78□□□□□ -1
MSH3-201ENST00000265081 GDF5OSQ5U4N7 250 aa8.78□□□□□ -1
MSH3-201ENST00000265081 ORM2P19652 201 aa8.78□□□□□ -1
MSH3-201ENST00000265081 RANP62826 216 aaKnown RBP8.78□□□□□ -1
MSH3-201ENST00000265081 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
MSH3-201ENST00000265081 KLRD1Q13241 179 aa8.78□□□□□ -1
MSH3-201ENST00000265081 FXYD3Q14802 87 aa8.78□□□□□ -1
MSH3-201ENST00000265081 BAGE2Q86Y30 109 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms