RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KCNIP4Q6PIL6 250 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
SSR3-201ENST00000265044 AAMDCQ9H7C9 122 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 ODF3BA8MYP8 253 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 ZNF207O43670 478 aaKnown RBP7.41□□□□□ -1.22
SSR3-201ENST00000265044 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
SSR3-201ENST00000265044 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 CLEC3BP05452 202 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
SSR3-201ENST00000265044 C2CD4CQ8TF44 421 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 YAE1D1Q9NRH1 226 aa7.41□□□□□ -1.22
SSR3-201ENST00000265044 GAR1Q9NY12 217 aaKnown RBP7.41□□□□□ -1.22
SSR3-201ENST00000265044 TRAV41A0A0B4J266 112 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 TMEM250H0YL14 139 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 SSTP61278 116 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 TMEM249Q2WGJ8 235 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 TACC2O95359 2948 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 TET2Q6N021 2002 aaPredicted RBP7.4□□□□□ -1.22
SSR3-201ENST00000265044 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 FNDC10F2Z333 226 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 LY6LH3BQJ8 138 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.22
SSR3-201ENST00000265044 PAX8Q06710 450 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 VWC2Q2TAL6 325 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 AARDQ4LEZ3 155 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 CYB5R2Q6BCY4 276 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 ZNF329Q86UD4 541 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
SSR3-201ENST00000265044 SAV1Q9H4B6 383 aaPredicted RBP7.4□□□□□ -1.22
SSR3-201ENST00000265044 IGKV1OR2-108A0A075B7D4 117 aa7.4□□□□□ -1.23
SSR3-201ENST00000265044 BMPR1BO00238 502 aa7.4□□□□□ -1.23
SSR3-201ENST00000265044 CFHR4Q92496 578 aa7.4□□□□□ -1.23
SSR3-201ENST00000265044 TXNDC17Q9BRA2 123 aa7.4□□□□□ -1.23
SSR3-201ENST00000265044 BEX4Q9NWD9 120 aaPredicted RBP7.4□□□□□ -1.23
SSR3-201ENST00000265044 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.23
SSR3-201ENST00000265044 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 M0QZK8 103 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 CTRB1P17538 263 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 RNF212Q495C1 297 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 CTRB2Q6GPI1 263 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 PPP5D1E7EU14 171 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 NDUFB8O95169 186 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 IL17RELQ6ZVW7 336 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 Q8N9W7 124 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 NHLRC2Q8NBF2 726 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 NPBQ8NG41 125 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 TRGV9Q99603 122 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 SOX21Q9Y651 276 aaPredicted RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 IGHV7-81A0A0B4J1V7 117 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 PGPEP1LA6NFU8 196 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 AP4M1O00189 453 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 SPINK4O60575 86 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 AMY1AP04745 511 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 CENPVQ7Z7K6 275 aaPredicted RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 TMEM37Q8WXS4 190 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 MRPL36Q9P0J6 103 aaKnown RBP7.39□□□□□ -1.23
SSR3-201ENST00000265044 RABAC1Q9UI14 185 aa7.39□□□□□ -1.23
SSR3-201ENST00000265044 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 GALR1P47211 349 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 BAGE2Q86Y30 109 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 LYPD6BQ8NI32 183 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 HSPB9Q9BQS6 159 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 RNF24Q9Y225 148 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 CD81P60033 236 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 NDPQ00604 133 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 DEFB112Q30KQ8 113 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 OR5R1Q8NH85 324 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 SORL1Q92673 2214 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 TRAV34A0A0B4J273 112 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 B4DEV8 164 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 HLA-DRB1P01911 266 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PLA2G2AP14555 144 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 SLC35B1P78383 322 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PRR20EP86478 221 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PRR20CP86479 221 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PRR20DP86480 221 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PRR20BP86481 221 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 PRR20AP86496 221 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 SGMS2Q8NHU3 365 aa7.38□□□□□ -1.23
SSR3-201ENST00000265044 NDUFA3O95167 84 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 IGHV4-59P01825 116 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 CT45A10P0DMU9 189 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 PAX1P15863 534 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 BLCAPP62952 87 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 OR10G8Q8NGN5 311 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 METTL26Q96S19 204 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 DERL1Q9BUN8 251 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 A0A1B0GW64 132 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 CGB1A6NKQ9 187 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 ZNF705GA8MUZ8 300 aaPredicted RBP7.37□□□□□ -1.23
SSR3-201ENST00000265044 RPL35P42766 123 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms