RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SRRM4A7MD48 611 aaKnown RBP16.15■□□□□ 0.18
CSPG5-201ENST00000264723 FAM106CPP0CH98 169 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 TMEM30BQ3MIR4 351 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 ISLRO14498 428 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 SNAI2O43623 268 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 FOXA2Q9Y261 457 aaPredicted RBP16.15■□□□□ 0.18
CSPG5-201ENST00000264723 TRBV20OR9-2A0A075B6H5 130 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 CD99P14209 185 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 SCGB2A2Q13296 93 aa16.15■□□□□ 0.18
CSPG5-201ENST00000264723 A8MWL6 223 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 M0QZ24 198 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 TIMM23O14925 209 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 KLRD1Q13241 179 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 DIAPH2-AS1Q14236 149 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 IGFL3Q6UXB1 125 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 WFDC3Q8IUB2 231 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 SRSF12Q8WXF0 261 aaKnown RBP16.14■□□□□ 0.18
CSPG5-201ENST00000264723 ABCA2Q9BZC7 2435 aa16.14■□□□□ 0.18
CSPG5-201ENST00000264723 CORTO00230 105 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 IGLV1-44P01699 117 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 OR52E5Q8NH55 327 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 AARDQ4LEZ3 155 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 BPIFA4PQ86YQ2 179 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 OR8A1Q8NGG7 326 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 CHODLQ9H9P2 273 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 BET1LQ9NYM9 111 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 SIAH2O43255 324 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 ZNF207O43670 478 aaKnown RBP16.14■□□□□ 0.17
CSPG5-201ENST00000264723 PROP1O75360 226 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 OR5AL1P0C617 328 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 PPP1R27Q86WC6 154 aa16.14■□□□□ 0.17
CSPG5-201ENST00000264723 NBEAQ8NFP9 2946 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 IGHV3-66A0A0C4DH42 116 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 K7ENP7 123 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 COL5A1-AS1Q5SY13 56 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 PARD6GQ9BYG4 376 aaPredicted RBP16.13■□□□□ 0.17
CSPG5-201ENST00000264723 WNK1Q9H4A3 2382 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 PF4V1P10720 104 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 MCRIP2Q9BUT9 160 aaKnown RBP16.13■□□□□ 0.17
CSPG5-201ENST00000264723 POLR3KQ9Y2Y1 108 aaPredicted RBP16.13■□□□□ 0.17
CSPG5-201ENST00000264723 TRAV8-1A0A0A6YYK1 113 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 NHLH1Q02575 133 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 C17orf58Q2M2W7 97 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 KLF17Q5JT82 389 aaPredicted RBP16.13■□□□□ 0.17
CSPG5-201ENST00000264723 Q8TCH9 128 aa16.13■□□□□ 0.17
CSPG5-201ENST00000264723 TANC2Q9HCD6 1990 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 PMS2P5A8MQ11 134 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 C5orf17Q8NAS9 161 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 OR4B1Q8NGF8 309 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 NAV3Q8IVL0 2385 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 NAV2Q8IVL1 2488 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 COX19Q49B96 90 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 RNF24Q9Y225 148 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 GOSR1O95249 250 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 WNT2P09544 360 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 IGHV1-8P0DP01 117 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 CEACAM8P31997 349 aaPredicted RBP16.12■□□□□ 0.17
CSPG5-201ENST00000264723 DMRTA1Q5VZB9 504 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 OR4C5Q8NGB2 326 aa16.12■□□□□ 0.17
CSPG5-201ENST00000264723 M0QZK8 103 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 LOXL3P58215 753 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 TDRG1Q3Y452 100 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 LURAP1LQ8IV03 231 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 SNHG12Q9BXW3 62 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 MFAP4P55083 255 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 SELENOKQ9Y6D0 94 aa16.11■□□□□ 0.17
CSPG5-201ENST00000264723 K7EN84 100 aa16.1■□□□□ 0.17
CSPG5-201ENST00000264723 GRNP28799 593 aaKnown RBP16.1■□□□□ 0.17
CSPG5-201ENST00000264723 SEM1Q6ZVN7 128 aa16.1■□□□□ 0.17
CSPG5-201ENST00000264723 UQCR10Q9UDW1 63 aa16.1■□□□□ 0.17
CSPG5-201ENST00000264723 LINC00527Q9UJ94 153 aa16.1■□□□□ 0.17
CSPG5-201ENST00000264723 LEPROTL1O95214 131 aa16.1■□□□□ 0.17
CSPG5-201ENST00000264723 IGHV2-26A0A0B4J1V2 119 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 GGTLC3B5MD39 225 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 LBHQ53QV2 105 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-201ENST00000264723 DMRTC2Q8IXT2 367 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-201ENST00000264723 NUDT10Q8NFP7 164 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 NUDT11Q96G61 164 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 COL25A1Q9BXS0 654 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-201ENST00000264723 CDC42EP3Q9UKI2 254 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 RNASE2P10153 161 aaKnown RBP16.09■□□□□ 0.17
CSPG5-201ENST00000264723 AREGP15514 252 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 UFC1Q9Y3C8 167 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 BMPR1BO00238 502 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 C1orf194Q5T5A4 169 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 Q6ZWC4 215 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 MIEN1Q9BRT3 115 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 RABAC1Q9UI14 185 aa16.09■□□□□ 0.17
CSPG5-201ENST00000264723 HTN1P15515 57 aa16.08■□□□□ 0.17
CSPG5-201ENST00000264723 ZNF138P52744 262 aa16.08■□□□□ 0.17
CSPG5-201ENST00000264723 CACNG8Q8WXS5 425 aa16.08■□□□□ 0.17
CSPG5-201ENST00000264723 MRPL32Q9BYC8 188 aaKnown RBP16.08■□□□□ 0.17
CSPG5-201ENST00000264723 USP9XQ93008 2570 aaPredicted RBP16.08■□□□□ 0.16
CSPG5-201ENST00000264723 FCER1GP30273 86 aa16.08■□□□□ 0.16
CSPG5-201ENST00000264723 SSBP2P81877 361 aaPredicted RBP16.08■□□□□ 0.16
CSPG5-201ENST00000264723 FAM169BQ8N8A8 192 aa16.08■□□□□ 0.16
CSPG5-201ENST00000264723 OSTCQ9NRP0 149 aa16.08■□□□□ 0.16
CSPG5-201ENST00000264723 TMEM14BQ9NUH8 114 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms