RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 FOXL2NBQ6ZUU3 175 aa12.43□□□□□ -0.42
CASC3-201ENST00000264645 OSR1Q8TAX0 266 aaPredicted RBP12.43□□□□□ -0.42
CASC3-201ENST00000264645 SSC4DQ8WTU2 575 aa12.43□□□□□ -0.42
CASC3-201ENST00000264645 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 C10orf55Q5SWW7 151 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 CIARTQ8N365 385 aaPredicted RBP12.42□□□□□ -0.42
CASC3-201ENST00000264645 FAM216BQ8N7L0 139 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 COQ2Q96H96 371 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 ARRDC1-AS1Q9H2J1 176 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 J3QW42 95 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 FRMD6-AS1P0C7T7 363 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 PRCDQ00LT1 54 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 TICRRQ7Z2Z1 1910 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 CENPFP49454 3210 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 KBTBD11-OT1A0A1B0GTJ5 212 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 PRRG2O14669 202 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 IGLV3-1P01715 115 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 CLEC2AQ6UVW9 174 aa12.42□□□□□ -0.42
CASC3-201ENST00000264645 NPIPB11E5RHQ5 1161 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 VWC2Q2TAL6 325 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 NCOR1P1Q9H4R4 102 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 NDUFA3O95167 84 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 FTH1P19P0C7X4 201 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 CECR9P0C854 216 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 MRPL20Q9BYC9 149 aaKnown RBP12.41□□□□□ -0.42
CASC3-201ENST00000264645 ACACAQ13085 2346 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 SAP30O75446 220 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 LEPP41159 167 aa12.41□□□□□ -0.42
CASC3-201ENST00000264645 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
CASC3-201ENST00000264645 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 OR5AN1Q8NGI8 311 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 YLPM1P49750 1951 aaKnown RBP12.4□□□□□ -0.42
CASC3-201ENST00000264645 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 FAM71F2Q6NXP2 309 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 OR4A5Q8NH83 315 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 TNCP24821 2201 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 COL4A6Q14031 1691 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 ADAMTSL5Q6ZMM2 481 aa12.4□□□□□ -0.42
CASC3-201ENST00000264645 PINLYPA6NC86 204 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 PRSS2P07478 247 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 LOXL3P58215 753 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 EBLN2Q6P2I7 272 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 ZGRF1Q86YA3 2104 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 ZC2HC1AQ96GY0 325 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 D6R8Y8 96 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 GOSR1O95249 250 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 NCR2O95944 276 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
CASC3-201ENST00000264645 MAFAQ8NHW3 353 aaPredicted RBP12.39□□□□□ -0.43
CASC3-201ENST00000264645 DNASE2BQ8WZ79 361 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 ANAPC13Q9BS18 74 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
CASC3-201ENST00000264645 PILRBQ9UKJ0 227 aa12.39□□□□□ -0.43
CASC3-201ENST00000264645 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.38□□□□□ -0.43
CASC3-201ENST00000264645 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 RPS20P60866 119 aaKnown RBP12.38□□□□□ -0.43
CASC3-201ENST00000264645 ERVK11-1P61568 191 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 EXOC3-AS1Q8N2X6 119 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 SNCGO76070 127 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 Q6AWC8 147 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 FAM168AQ92567 244 aa12.38□□□□□ -0.43
CASC3-201ENST00000264645 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
CASC3-201ENST00000264645 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 ATP5LO75964 103 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■■□ 22
CASC3-201ENST00000264645 IGHV3OR16-13A0A075B7E8 117 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 IGHV3-74A0A0B4J1X5 117 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 IGHV1-24A0A0C4DH33 117 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 A0A1B0GW15 77 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 TMEM78Q5T7P6 136 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 CENPVQ7Z7K6 275 aaPredicted RBP12.37□□□□□ -0.43
CASC3-201ENST00000264645 C9orf118A6NHY6 69 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 PRSS57Q6UWY2 283 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 Q6ZT83 130 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
CASC3-201ENST00000264645 DTX1Q86Y01 620 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 PSG8Q9UQ74 426 aa12.37□□□□□ -0.43
CASC3-201ENST00000264645 ETV2O00321 342 aaPredicted RBP12.36□□□□□ -0.43
CASC3-201ENST00000264645 CCL3L1P16619 93 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 EVI2AP22794 236 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
CASC3-201ENST00000264645 DEFB125Q8N687 156 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 ASCL2Q99929 193 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 RABAC1Q9UI14 185 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 FOXA2Q9Y261 457 aaPredicted RBP12.36□□□□□ -0.43
CASC3-201ENST00000264645 TRGV8A0A0C4DH27 118 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms