RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 SRSF3P84103 164 aaKnown RBP13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 FAM169BQ8N8A8 192 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 NDUFAF3Q9BU61 184 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 LHFPL1Q86WI0 220 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 PSG1P11464 419 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 PPIFP30405 207 aaKnown RBP13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 ORMDL2Q53FV1 153 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 NUDT10Q8NFP7 164 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 ZNF474Q6S9Z5 364 aaPredicted RBP13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 NUDT11Q96G61 164 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 C14orf144Q96I85 54 aa13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
CROCCP3-201ENST00000263511 PRDM13Q9H4Q3 707 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 SEPSECSQ9HD40 501 aaKnown RBP13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 MBD3L1Q8WWY6 194 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 KLHDC3Q9BQ90 382 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 BUB1B-PAK6H3BSN5 160 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 CHCHD5Q9BSY4 110 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 TRBV7-1A0A0A6YYK4 115 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 GHRHP01286 108 aa13.84□□□□□ -0.19
CROCCP3-201ENST00000263511 TRAV5A0A0B4J249 113 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 H0YJW9 148 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 SNAI2O43623 268 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 HBDP02042 147 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 ZNF124Q15973 351 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 TEX38Q6PEX7 206 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 LINC01356Q8N9X3 169 aa13.83□□□□□ -0.19
CROCCP3-201ENST00000263511 PMS2P5A8MQ11 134 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 OCC1Q8TAD7 63 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 WFDC12Q8WWY7 111 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 VGLL1Q99990 258 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 CRIM1Q9NZV1 1036 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 K7ENP7 123 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 RPL15P61313 204 aaKnown RBP13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 ERVK11-1P61568 191 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 USMG5Q96IX5 58 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 TRGV9Q99603 122 aa13.83□□□□□ -0.2
CROCCP3-201ENST00000263511 TRBV6-6A0A0A6YYG2 114 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 TMEM155Q4W5P6 130 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 WFDC1Q9HC57 220 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 LDLRAD4O15165 306 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 TSKUQ8WUA8 353 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 SLC25A39Q9BZJ4 359 aaPredicted RBP13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 POLEQ07864 2286 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 NPIPB5A8MRT5 1133 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 APOMO95445 188 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 BPESC1Q9GZL8 116 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 SERF1AO75920 110 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 FGF16O43320 207 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 CD28P10747 220 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 COL8A2P25067 703 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 TTC32Q5I0X7 151 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 OR9G4Q8NGQ1 327 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 PRADC1Q9BSG0 188 aa13.82□□□□□ -0.2
CROCCP3-201ENST00000263511 COQ2Q96H96 371 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 NDUFS8O00217 210 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 LILRA1O75019 489 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 GFI1BQ5VTD9 330 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 KIR3DL3Q8N743 410 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 FREM3P0C091 2139 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 IGKV1D-17A0A075B6S4 117 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 ZNF415Q09FC8 603 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 Q6P435 159 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 ST6GALNAC6Q969X2 333 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 NRN1Q9NPD7 142 aa13.81□□□□□ -0.2
CROCCP3-201ENST00000263511 LINC01549A6NIU2 74 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 SCRT1Q9BWW7 348 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 GPR179Q6PRD1 2367 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 SLC25A20O43772 301 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 VSIRQ9H7M9 311 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 ADARB2-AS1A8MUL3 147 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 RNF182Q8N6D2 247 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 ROS1P08922 2347 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 C5orf63A6NC05 138 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 ZNF688P0C7X2 276 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 LINC00614P0C842 121 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 SIGLEC9Q9Y336 463 aa13.8□□□□□ -0.2
CROCCP3-201ENST00000263511 PGPEP1LA6NFU8 196 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 ADMP35318 185 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 IGKV1-5P01602 117 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 KLF17Q5JT82 389 aaPredicted RBP13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 FOXL2NBQ6ZUU3 175 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 MED12Q93074 2177 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 A0A087WX48 190 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 SP5Q6BEB4 398 aaPredicted RBP13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 ATP5L2Q7Z4Y8 100 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 ABCA4P78363 2273 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 MYO7BQ6PIF6 2116 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 E7EQL1 145 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms