RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TNXAQ16473 311 aa10.26□□□□□ -0.77
LIG1-201ENST00000263274 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
LIG1-201ENST00000263274 ZNF788Q6ZQV5 615 aa10.26□□□□□ -0.77
LIG1-201ENST00000263274 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
LIG1-201ENST00000263274 MRPL52Q86TS9 123 aaKnown RBP10.26□□□□□ -0.77
LIG1-201ENST00000263274 DAZAP1Q96EP5 407 aaKnown RBP10.26□□□□□ -0.77
LIG1-201ENST00000263274 KCNS1Q96KK3 526 aa10.26□□□□□ -0.77
LIG1-201ENST00000263274 MAP1AP78559 2803 aaPredicted RBP10.25□□□□□ -0.77
LIG1-201ENST00000263274 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 PDPNQ86YL7 162 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 LOXL4Q96JB6 756 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 RNF2Q99496 336 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 FNDC4Q9H6D8 234 aaPredicted RBP10.25□□□□□ -0.77
LIG1-201ENST00000263274 TPSG1Q9NRR2 321 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 BET1LQ9NYM9 111 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 NDUFB3O43676 98 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 PLGLAQ15195 96 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 OR4B1Q8NGF8 309 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 TNFRSF14Q92956 283 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 ST6GALNAC6Q969X2 333 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 ASCL2Q99929 193 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 FAM215AQ9Y5M1 114 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 TRAV9-1A0A075B6T8 112 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 TRBV9A0A0B4J1U6 114 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 A0A1W2PRE2 83 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 K7EM74 188 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 PEX7O00628 323 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 CSN3P07498 182 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 CFHR2P36980 270 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 WT1-ASQ06250 92 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 Q0VG73 95 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 LYPD2Q6UXB3 125 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 C1orf174Q8IYL3 243 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 ORAOV1Q8WV07 137 aa10.25□□□□□ -0.77
LIG1-201ENST00000263274 ZNF430Q9H8G1 570 aaPredicted RBP10.25□□□□□ -0.77
LIG1-201ENST00000263274 PTPRBP23467 1997 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 ODF1Q14990 250 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 SLC25A2Q9BXI2 301 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 TNFRSF19Q9NS68 423 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
LIG1-201ENST00000263274 ZNF257Q9Y2Q1 563 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 PPIAL4EA0A075B759 164 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 PPIAL4DF5H284 164 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 KLK10O43240 276 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 PPIAL4FP0DN26 164 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 TBR1Q16650 682 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 OR1L4Q8NGR5 311 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 TSKUQ8WUA8 353 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 PGLYRP4Q96LB8 373 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 TACC2O95359 2948 aa10.24□□□□□ -0.77
LIG1-201ENST00000263274 LOC105371242A0A075B767 164 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 MBD3L4A6NDZ8 208 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 MBD3L5A6NJ08 208 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 SH2D7A6NKC9 451 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 OR4C13Q8NGP0 309 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 OSR1Q8TAX0 266 aaPredicted RBP10.23□□□□□ -0.77
LIG1-201ENST00000263274 SELENOKQ9Y6D0 94 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 H0YJW9 148 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 CR1LQ2VPA4 569 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 LRRC10Q5BKY1 277 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 KIR3DL3Q8N743 410 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 LY96Q9Y6Y9 160 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 COX7A1P24310 79 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 LYZP61626 148 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 VMA21Q3ZAQ7 101 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 COX11Q9Y6N1 276 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 ARL2-SNX15V9GYD0 113 aa10.23□□□□□ -0.77
LIG1-201ENST00000263274 HYPMO75409 117 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 RITA1Q96K30 269 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 MCRIP2Q9BUT9 160 aaKnown RBP10.22□□□□□ -0.77
LIG1-201ENST00000263274 CLEC7AQ9BXN2 247 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 RBP4P02753 201 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 NDUFA4L2Q9NRX3 87 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 TLN1Q9Y490 2541 aaKnown RBP10.22□□□□□ -0.77
LIG1-201ENST00000263274 IGLV3-9A0A075B6K5 115 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 LYNX1G3V0Z9 82 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 FAM87AP0C7U9 286 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 LYNX1P0DP58 116 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 FOXC1Q12948 553 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 PATE2Q6UY27 113 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 FAM167A-AS1Q96KT0 104 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 OR8B2Q96RD0 313 aa10.22□□□□□ -0.77
LIG1-201ENST00000263274 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms