RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 M0R2Z0 102 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 COX7A1P24310 79 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 TCTAP57738 103 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 ADIPOQQ15848 244 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 WDR73Q6P4I2 378 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.35□□□□□ -1.23
MSH4-201ENST00000263187 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 FAM222BQ8WU58 562 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 ZNF257Q9Y2Q1 563 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 GOLT1BQ9Y3E0 138 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 IGKV1D-37A0A075B6S9 117 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 A0A1B0GWJ7 208 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 C22orf46C9J442 243 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 CSN3P07498 182 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 STPG4Q8N801 248 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 PMCHL2Q9BQD1 86 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 GAL3ST2Q9H3Q3 398 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 TNFRSF19Q9NS68 423 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 BET1LQ9NYM9 111 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 A0A1W2PRE2 83 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 TCF21O43680 179 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 TBR1Q16650 682 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 LINC00173Q6ZV60 143 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 PDPNQ86YL7 162 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 C11orf42Q8N5U0 333 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 CTSZQ9UBR2 303 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 LINC00312Q9Y6C7 94 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 PPIAL4EA0A075B759 164 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 IZUMO1RA6ND01 250 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 C17orf100A8MU93 164 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 PPIAL4DF5H284 164 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 HYPMO75409 117 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 PPIAL4FP0DN26 164 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 ZNF833PQ6ZTB9 187 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 C1orf174Q8IYL3 243 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 OR4C13Q8NGP0 309 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 RNF2Q99496 336 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 C20orf144Q9BQM9 153 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 RAB9BQ9NP90 201 aa7.34□□□□□ -1.23
MSH4-201ENST00000263187 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 A0A0G2JNJ9 132 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 PSMB11A5LHX3 300 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 NDUFB3O43676 98 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 LY6HO94772 140 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 HLA-DQA1P01909 254 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 GATA4P43694 442 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 HNRNPA3P51991 378 aaKnown RBP7.33□□□□□ -1.24
MSH4-201ENST00000263187 LYZP61626 148 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 POU2AF1Q16633 256 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 MUC21Q5SSG8 566 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 SPATA12Q7Z6I5 190 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 OSR1Q8TAX0 266 aaPredicted RBP7.33□□□□□ -1.24
MSH4-201ENST00000263187 DYNLRB1Q9NP97 96 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 Q9UFV3 132 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 DLEU1O43261 78 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 TNFRSF1AP19438 455 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 RPL19P84098 196 aaKnown RBP7.33□□□□□ -1.24
MSH4-201ENST00000263187 PRR30Q53SZ7 412 aaPredicted RBP7.33□□□□□ -1.24
MSH4-201ENST00000263187 EBLN2Q6P2I7 272 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 OR8B2Q96RD0 313 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 LY96Q9Y6Y9 160 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 TCRBV4S1A1TA0A5B7 111 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 CIARTQ8N365 385 aaPredicted RBP7.33□□□□□ -1.24
MSH4-201ENST00000263187 OR5AN1Q8NGI8 311 aa7.33□□□□□ -1.24
MSH4-201ENST00000263187 C16orf97H3BN30 126 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 RBP4P02753 201 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 MT-ND6P03923 174 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 NBEAP1P0C6P0 100 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 ESDP10768 282 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 TMEM177Q53S58 311 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 UNQ5815/PRO19632Q6UWF5 114 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 SELENOKQ9Y6D0 94 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 SIAH2O43255 324 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 IGLV2-23P01705 113 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 PRRX1P54821 245 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 BPIFB3P59826 476 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 PLGLAQ15195 96 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 LRRC10Q5BKY1 277 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
MSH4-201ENST00000263187 PRNTQ86SH4 94 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 OR4B1Q8NGF8 309 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 C17orf77Q96MU5 243 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 FBXL15Q9H469 300 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 EPDR1Q9UM22 224 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 ITGB1BP1O14713 200 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 IGLC2P0DOY2 106 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 IGLC3P0DOY3 106 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 OR10J3Q5JRS4 329 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 WASHC3Q9Y3C0 194 aa7.32□□□□□ -1.24
MSH4-201ENST00000263187 CHD8Q9HCK8 2581 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 IGHV3OR16-8A0A075B7F1 116 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 FAM181BA6NEQ2 426 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms