RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 MBNL3Q9NUK0 354 aaKnown RBP13.35□□□□□ -0.27
SREBF1-201ENST00000261646 V9GYV3 84 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 GTF3C1Q12789 2109 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 H7C2G1 150 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 COLCA1Q6ZS62 124 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 IGHV2OR16-5A0A0B4J2B6 119 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 MLNRO43193 412 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 HERVK_113P61574 105 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 ASPHD1Q5U4P2 390 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 S4R3C0 116 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 IGKV3-7A0A075B6H7 116 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 TMEM238LA0A1B0GVL6 79 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 A6NJY4 79 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 PRR33A8MZF0 331 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 CD5LO43866 347 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 OR4A5Q8NH83 315 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 FOXC2Q99958 501 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 RASL11AQ6T310 242 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 SIGMAR1Q99720 223 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 PCNX2A6NKB5 2137 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-201ENST00000261646 LMO1P25800 156 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 PSG9Q00887 426 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 SFTA2Q6UW10 78 aa13.34□□□□□ -0.27
SREBF1-201ENST00000261646 MRPS18CQ9Y3D5 142 aaKnown RBP13.34□□□□□ -0.27
SREBF1-201ENST00000261646 TRBV20OR9-2A0A075B6H5 130 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 OR11H12B2RN74 326 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 CEACAM3P40198 252 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 FXYD7P58549 80 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 B3GALT5-AS1P59052 145 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 ZFP36L1Q07352 338 aaKnown RBP13.33□□□□□ -0.27
SREBF1-201ENST00000261646 OR11H1Q8NG94 326 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 OR11H2Q8NH07 326 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 GTSF1LQ9H1H1 148 aa13.33□□□□□ -0.27
SREBF1-201ENST00000261646 TCRBV4S1A1TA0A5B7 111 aa13.33□□□□□ -0.28
SREBF1-201ENST00000261646 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
SREBF1-201ENST00000261646 OR5A1Q8NGJ0 315 aa13.33□□□□□ -0.28
SREBF1-201ENST00000261646 TMEM186Q96B77 213 aa13.33□□□□□ -0.28
SREBF1-201ENST00000261646 CD24P25063 80 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 ZNF71Q9NQZ8 489 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-201ENST00000261646 LSM4Q9Y4Z0 139 aaKnown RBP13.32□□□□□ -0.28
SREBF1-201ENST00000261646 IL18BPO95998 194 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 CCL3L1P16619 93 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 LGALS7P47929 136 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 DLX1P56177 255 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 HSD52Q0P140 79 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 M0R3E3 92 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 SAMD5Q5TGI4 173 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 OBSL1O75147 1896 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 TEX45Q8NA69 505 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 IFI27L1Q96BM0 104 aa13.32□□□□□ -0.28
SREBF1-201ENST00000261646 PLA2G5P39877 138 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 CIARTQ8N365 385 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-201ENST00000261646 ZNF418Q8TF45 676 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-201ENST00000261646 FOXA2Q9Y261 457 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-201ENST00000261646 HBDP02042 147 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 Q0VFX4 171 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 NEUROG1Q92886 237 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 TRGV8A0A0C4DH27 118 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 SPACA3Q8IXA5 215 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 OR1N2Q8NGR9 330 aa13.31□□□□□ -0.28
SREBF1-201ENST00000261646 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
SREBF1-201ENST00000261646 IGHV2-26A0A0B4J1V2 119 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 K7EN84 100 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 RPS20P60866 119 aaKnown RBP13.3□□□□□ -0.28
SREBF1-201ENST00000261646 CD177Q8N6Q3 437 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
SREBF1-201ENST00000261646 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 GLRXP35754 106 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 KIR3DS1Q14943 382 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 FBXL15Q9H469 300 aa13.3□□□□□ -0.28
SREBF1-201ENST00000261646 PRUNE2Q8WUY3 3088 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 GP6Q9HCN6 339 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 OR5AN1Q8NGI8 311 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 C9orf172C9J069 976 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 TMEM78Q5T7P6 136 aa13.29□□□□□ -0.28
SREBF1-201ENST00000261646 CENPVQ7Z7K6 275 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-201ENST00000261646 Q6AWC8 147 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 BCL6BQ8N143 479 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-201ENST00000261646 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 IGHV3OR16-8A0A075B7F1 116 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 MMP23AO75900 390 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 PIEZO2Q9H5I5 2752 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 KIR3DL3Q8N743 410 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 OTORQ9NRC9 128 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■■□□ 18.5
SREBF1-201ENST00000261646 A0A1B0GW15 77 aa13.28□□□□□ -0.28
SREBF1-201ENST00000261646 C16orf97H3BN30 126 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms