RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CGB7P0DN87 165 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 WT1-ASQ06250 92 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
LMNB1-201ENST00000261366 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 ZCCHC24Q8N2G6 241 aaKnown RBP12.84□□□□□ -0.35
LMNB1-201ENST00000261366 TMEM178AQ8NBL3 297 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 TPPP3Q9BW30 176 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 P01737 135 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 CCL3L1P16619 93 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 PRB3Q04118 309 aaPredicted RBP12.84□□□□□ -0.35
LMNB1-201ENST00000261366 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
LMNB1-201ENST00000261366 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
LMNB1-201ENST00000261366 CST9LQ9H4G1 147 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 DLL1O00548 723 aa12.83□□□□□ -0.35
LMNB1-201ENST00000261366 CHEK1O14757 476 aa12.83□□□□□ -0.35
LMNB1-201ENST00000261366 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 IGHV3-72A0A0B4J1Y9 119 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 APOA2P02652 100 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 LRRC10Q5BKY1 277 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.36
LMNB1-201ENST00000261366 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
LMNB1-201ENST00000261366 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 EPDR1Q9UM22 224 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 TEX45Q8NA69 505 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 C19orf24Q9BVV8 132 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 RPP21Q9H633 154 aaKnown RBP12.83□□□□□ -0.36
LMNB1-201ENST00000261366 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
LMNB1-201ENST00000261366 TPSG1Q9NRR2 321 aa12.83□□□□□ -0.36
LMNB1-201ENST00000261366 KLK10O43240 276 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 OR2J3O76001 311 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 FAM87AP0C7U9 286 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 CIARTQ8N365 385 aaPredicted RBP12.82□□□□□ -0.36
LMNB1-201ENST00000261366 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 BPIFB3P59826 476 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 ZZEF1O43149 2961 aa12.82□□□□□ -0.36
LMNB1-201ENST00000261366 SPAARA0A1B0GVQ0 90 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 PSG9Q00887 426 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 MZT1Q08AG7 82 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 BHLHA15Q7RTS1 189 aaPredicted RBP12.81□□□□□ -0.36
LMNB1-201ENST00000261366 TMEM116Q8NCL8 245 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 DEFB124Q8NES8 71 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 TMEM191AQ9H0A3 160 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 DSCAML1Q8TD84 2053 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 OTOGLQ3ZCN5 2332 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 hADV38S2A0JD32 116 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 PPIAL4DF5H284 164 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 NKX2-8O15522 239 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 WT1P19544 449 aaPredicted RBP12.81□□□□□ -0.36
LMNB1-201ENST00000261366 FXYD7P58549 80 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 CCL8P80075 99 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
LMNB1-201ENST00000261366 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.8□□□□□ -0.36
LMNB1-201ENST00000261366 OR1L4Q8NGR5 311 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 GPR82Q96P67 336 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 TCRBV4S1A1TA0A5B7 111 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
LMNB1-201ENST00000261366 SLC25A17O43808 307 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 NBEAP1P0C6P0 100 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 GAFA1Q96PS6 74 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
LMNB1-201ENST00000261366 A8MWL6 223 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 COL8A1P27658 744 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 HTR1DP28221 377 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 DLX1P56177 255 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 TNFAIP6P98066 277 aaPredicted RBP12.79□□□□□ -0.36
LMNB1-201ENST00000261366 POU2AF1Q16633 256 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 SLC25A48Q6ZT89 311 aaKnown RBP12.79□□□□□ -0.36
LMNB1-201ENST00000261366 PRNTQ86SH4 94 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 H1FXQ92522 213 aaKnown RBP12.79□□□□□ -0.36
LMNB1-201ENST00000261366 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
LMNB1-201ENST00000261366 PROCRQ9UNN8 238 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 RITA1Q96K30 269 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 ZNF71Q9NQZ8 489 aaPredicted RBP12.79□□□□□ -0.36
LMNB1-201ENST00000261366 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
LMNB1-201ENST00000261366 CGB1A6NKQ9 187 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 C22orf46C9J442 243 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 RIPPLY3P57055 190 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 EXOC3-AS1Q8N2X6 119 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 CHRDL1Q9BU40 450 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 LOC389332A0A1B0GUA5 103 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms